Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0131 ATGGAGCTCTTGAAACCTTCTCATCCTCCTCAGCATCAGCAGTCTGTGGCCGCCGGAGACCCCTTCCATGGCTTCTCACCACCCCTCCCTCTGACTTTGCCCTTTGCTTCCCAGGGAGCCGCCACCTCCCAGCTACCCCGGCCCATGGAAGAATGTACTGAATCCGTGTACGTTGCTGTCGGAAAGTCGGTGGACAAAGCTGTTCGTTTGCTTCAATGGACTTTTGGCCGCTTCAGCAACTCACAAATTCGCATTCTCCATGTTTATCAACCTTCCTCTATGATCCCCACTCTTTTGGGAAAATTGCCCGCAACCCAAGCGAATCCTGAAGTCGTTTCTGCTTTTAGAAGAGAGGAAAGAGAACAGACTACGAGGCTTTTGGAAAATTATCTGAGCATTTGCCGTGCAGCTAAGGTTATGGCAACCAGTGTGATAGGTGAAGCTGAGCAAGTGCACAAAGGAATTGTTGATTTAATTATCAGGCATGGTGTTAGGAAGCTTGTTATAGGAGCAGTGCCCGAGAATCGCATGAAGGTGAAAAGGAATTCCAAGAAAGCAAATTATGCTGCCAAGAATGCTCCCCCATTCTGTGAGATATGGTTTATCCACAAAGGTAAACACATATGGACAAGAGAAGCTTCTGAAAATCCTTGTTCCTTGTCTTCACAAGCTCAACCTGAGATTGCTGCCTCAGACAGCTTGATAACCAGATCATTTCAATATGGCGAGAGTGAATTATTCCATAGATCAAATTCTGCAAGAACTGCAATCTGTACTGGAGCTGGTAGTTGTTCTCAGGGGGAAATCTTAGAAACAGATGCAACTTCATCCAAATCATCTACTTGTACCAGTCACTGTTCTCCCCAAAGTTCTACTGGTGGTTATTTAGAGGCTTCTTCTGATGTTGAAGAAGATAAACTTCGCAATCAACTTGCTGAAGCCATAATAGAAGTTGAGGCTGCGAAGGATAAGGGTGTTGCGGAGCTTTTGAAATGCAAAAGACTTGAAGCAGAAGCTATGGAAGCCATAAAGAAGGTCAATATGCTTGAATCTGCTTATGCATATGAAGTAAAGCTAAGAAAAGAGGCAGAGAATGCGCTGCAAGCCACAGTACAGGAGCAACAAAAACTCTTGGATGAGAGTGAAGAAGTTGCTAGTGTGCTACAAAGGACCATGAGAAATATTACCCTTCTGGACAGTCGTGCACAGGAAGCAAACCGCAGGCATGATGAAGCTGCAGATGAGTTATTATTAATTCAAGCATCCATATCAACCCTGTGGCATGAAAAGCAGCAGATCAGGAGACAAAAAATGGAAGCCCTCCACTGGCTTGAGCGATGGAAAAGTCGGGGACATTTTGGAGCTGCACACTGCCACGGGGTCATTGGATTTGCTGAAGAATTACCTGAGTTAGCAGAATTTTCACTTTCAGATCTTCAAAATGCTACGTGCAATTTTTCTGAGAGCTTCAAAATTGCACAGGGAGGATATGGTTGCATTTATAAGGGGGAAATGCTGGGTAGAACAGTTGCTATTAGGAAGTTCCATCCACATAACATGCAAGGACCGGCTGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGCCTCCAGCATCCTCGTCTATTGACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCACTAGTGTATGAGTACTTACCCAATGGGAGTCTTCAAGACCTCCTATTCCGGAAAAACAGCAATTCCCCTCTGACATGGAATAGCCGAGCACGTATGATTGCTGAAATTGCTAGTGCTCTTTGCTTTTTACACACTTCCAAACCCAAAACTATTGTCCATGGTGACCTAAAGCCTGAAACGATACTTCTTGACTCGGCACTTAGTTGCAAGATATGTGAATTTGGGTTCTGCAGGCTGTTGCCAGAGGAGTCACTCTATCGTCCTAGTTTCAGATTCAGCACTGAGCTAAAAAGTACTTCTACATATACAGATCCAGAGTTTGAGAGGACTGGAATACTAACACCGAAGTCTGATATCTATTCCTTTGGACTCATCATTTTGCAACTGCTGACTGGCAGGACTATTCCAGTTGGGTTAGCAGGTGAAGTGCGCAAGGCAGTATCATGTGGAAAATTGTCTTCAATTTTGGATTCTACAGCTGGGGAATGGCCTCCAGCTGTGGCAACGCAATTGGTTGAACTAGGACTGCAATGCTGCCAGCAAAAAGGCAGAGATAGACCAGAGCTAACACCCACTTTGGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGACCGACCAGTGCCATCATTTTTCTTATGTCCTATCCTTCAGGAAATAATGCTTGATCCCCAGGTTGCAGCAGACGGGTTCACTTACGAAGGGGAAGCTATACAGGAATGGCTGGAAAATGGTCATGAGACTTCTCCCATGACTAATTTAAAATTGAGTCACCTGCATCTGACGCCCAATCATGCTCTTCGTCTTGCGATCCAAGACTGGCTTTGCAAATCCTGA 2496 0.4511 MELLKPSHPPQHQQSVAAGDPFHGFSPPLPLTLPFASQGAATSQLPRPMEECTESVYVAVGKSVDKAVRLLQWTFGRFSNSQIRILHVYQPSSMIPTLLGKLPATQANPEVVSAFRREEREQTTRLLENYLSICRAAKVMATSVIGEAEQVHKGIVDLIIRHGVRKLVIGAVPENRMKVKRNSKKANYAAKNAPPFCEIWFIHKGKHIWTREASENPCSLSSQAQPEIAASDSLITRSFQYGESELFHRSNSARTAICTGAGSCSQGEILETDATSSKSSTCTSHCSPQSSTGGYLEASSDVEEDKLRNQLAEAIIEVEAAKDKGVAELLKCKRLEAEAMEAIKKVNMLESAYAYEVKLRKEAENALQATVQEQQKLLDESEEVASVLQRTMRNITLLDSRAQEANRRHDEAADELLLIQASISTLWHEKQQIRRQKMEALHWLERWKSRGHFGAAHCHGVIGFAEELPELAEFSLSDLQNATCNFSESFKIAQGGYGCIYKGEMLGRTVAIRKFHPHNMQGPAEFHQEVQVLGSLQHPRLLTLLGVCPEAWSLVYEYLPNGSLQDLLFRKNSNSPLTWNSRARMIAEIASALCFLHTSKPKTIVHGDLKPETILLDSALSCKICEFGFCRLLPEESLYRPSFRFSTELKSTSTYTDPEFERTGILTPKSDIYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLSSILDSTAGEWPPAVATQLVELGLQCCQQKGRDRPELTPTLVRELEQLHVSEDRPVPSFFLCPILQEIMLDPQVAADGFTYEGEAIQEWLENGHETSPMTNLKLSHLHLTPNHALRLAIQDWLCKS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0131 831 SUPERFAMILY Protein kinase-like (PK-like) 470 747 IPR011009 -
Lele32g0131 831 Coils Coil 332 352 - -
Lele32g0131 831 Gene3D HUPs 55 200 IPR014729 -
Lele32g0131 831 Gene3D Phosphorylase Kinase; domain 1 463 558 - -
Lele32g0131 831 CDD RING-Ubox_WDSUB1_like 765 806 - -
Lele32g0131 831 ProSiteProfiles Protein kinase domain profile. 486 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0131 831 CDD STK_N 55 205 - -
Lele32g0131 831 PANTHER OS02G0152300 PROTEIN 56 825 - -
Lele32g0131 831 MobiDBLite consensus disorder prediction 1 21 - -
Lele32g0131 831 Pfam Protein tyrosine and serine/threonine kinase 491 743 IPR001245 GO:0004672|GO:0006468
Lele32g0131 831 SUPERFAMILY RING/U-box 758 830 - -
Lele32g0131 831 Gene3D Transferase(Phosphotransferase) domain 1 559 760 - -
Lele32g0131 831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 761 831 IPR013083 -
Lele32g0131 831 Pfam U-box domain 761 830 IPR003613 GO:0004842|GO:0016567
Lele32g0131 831 MobiDBLite consensus disorder prediction 277 297 - -
Lele32g0131 831 SMART Ubox_2 764 827 IPR003613 GO:0004842|GO:0016567
Lele32g0131 831 MobiDBLite consensus disorder prediction 277 299 - -
Lele32g0131 831 ProSiteProfiles U-box domain profile. 760 831 IPR003613 GO:0004842|GO:0016567
Lele32g0131 831 Coils Coil 360 415 - -
Lele32g0131 831 Coils Coil 304 324 - -
Lele32g0131 831 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0131 Lele-ChrLele32 736556 741268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0131 54 828 U-box Gene Family AT2G45910 38.481 3.93e-177 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele32g0131 PK_Tyr_Ser-Thr 5.6e-33 CL0016