Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0123 ATGAATCTTCACTTTGATGGAAGTCAAGGTCCTATAAACCGTTATAAACTCGATGATGGCGCCGCCAGCTTCGACTCAAACTATATCCCATATCCATCGAACGAGTGGGAACTTGACGAGAGCTATCGGAAACTTCTTAACTTCACAACCGATCCATTGTATCAACCTTATGCGAGTCCAGTCAGTTTTGCTCCGCATAGTAGCGTGAAATATGAAGGATCAGAGCGGTTAGCTTCATCCTCGACTATAGACCCTGTAGGAGGCGTGTCAGATGCGGCGGCTGCGTCTACGACTTCGCCGCCAGATCCTTCGATGGAAGACGCTGACTTCTCAGAAACTATGAGGTACATAAGCCAAATTCTTATGGAAGAGAACTTTGAACAGAAGCCAAGCATGTTTTATGATCCTTTGAGTCTACAAGTCACGGAGAAATCGTTCTATGATGCTCTCAGAAAGGATCATCCTCTTTCCCCCGATCAGCATCCCCTAGACGTTCATCAGAATCTTGACAGCACAGATGATAACTGTTGTGGTAGTAGTATTGATGGTGTCAATAACAGGAGCAGCATCAACAACTCTCAGGACGCTAATAAGCCCTCTTCCTCCGATGCTTCATTTTTTGGTGATTATGCGTCCCAGTTAAATTTTCAACCCATCTCTGAGAAACCCTCTCAACCTCCGAGTGCTTATACTAATATGAGCGACGGATTCTCAGATGTGGATTCCTCTTTTACTAGGATCATGGCTCAAAATATCTTTACTGATGCAGAATCTGTTTCACAATTTAAAAGGGGATTGGAAGAAGCCAGCAAGTTTCTTCCTAAAGGACTTCAACTTGTCACTGGTCTGGACAGAAACAATGGGCTTCCAGAGTCAATGGGAGTGGCTAAAAAGGCAGTAGGGAATATTCGGGAGAATTCATATGGATTGAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAACAAGCATTCGGCAGTGTATGTGGACGAGAGTGATATATCAGAAATGTTCGATAAGGTGTTGCTTAGTGTTGAGAATGTTCCATTATGTGAGGAACACCACGTATGGATGCAGAATGGAACAGACAAGGCCAAAAAGCCAATTGAATATCCAAATTCATCTAATGGGGTGAAGACCCGCGGTAGGAGACAGGGCAGGAAGAAGGAAACCGTGGACTTGAGGACTCTTATGGCTTTGTGCGCGCAAGCTGTGTCTGCAAATGACTGCAGAACTGCCAATGAACTGCTAAAGCAGATTAGGCAGCATTCTTCCCAACTCGGTGATGCGTCACAGAGGCTGGCTCATTACTTTGCCAATGGCCTTGAAGCGCGCTTGTCTGGCTTTGGTACTGGAACCCAAATATTCTATGCCTCTCTAAGTTCCAAGAGGATATCTTCTGCTAATATCTTGAGAGCTTACTCAGTTCTAATATCTGTCTGCCCCTTCAGGAAGTTTGCATATTTTTTTGCAAATAAGACGATTATGGAAGCAGCTGAAAAGGCAGAAACTCTTCATATTATCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTCCTTTCAAAAAGAGCTGGTGGGCCTCCGAAGCTACGCATCACAGGGATAGAATTGCCCCAAGTTGGGTTTCGTCCGGCAGAATTAATTGAGGAGACCGGTAGACGTCTATCTAATTATTGCAAACGTTTTAATGTTCCGTTTGAATACACAGCCATAGCATCACAAAACTGGGAAACCATCCCGTTAAAGGACTTTAAGATTGAGAGGAACGAACTGCTCGCTGTGAACTGTATGCTGAGGCTTAAAAATTTGCTGGACGAGACGATTGAAGTAAAAAGTCCTAGAGATGCAGTTTTGAATTTGATCAGAAAGATGAATCCTAATATTTTTGTTCAATCCATTGTCAATGGATCCTACAATGCCCCTTTCTTCGCCTCACGGTTCAAAGAGGCACTGTTCCATTATTCTGCAATGTATGACATGTTTGACACGGTAATACCTCGTGAAAATGAGTGGAGGTTGATGCTTGAGAGAGAGTTTTTGGGTCGGGAGATCATGAACGTGGTAGCGTGTGAAGGGGTCGAGAGGGTCGAGAGGCCCGAGACATACAAACATTGGCAAGTTAGGAATACAAGGGCCGGTTTCAGGCAGCTGCCACTGTCAGATGAGATAATGGTAAAATTCAATGAAAAGTTTAAGGCGTGGTATCACAGGGATTTCGTCATTGATGAAGACCACAACTGGATGCTTCAGGGCTGGAAGGGCCGCATCATTTATGCTTCCACATGTTGGGTGCCATCATAA 2337 0.442 MNLHFDGSQGPINRYKLDDGAASFDSNYIPYPSNEWELDESYRKLLNFTTDPLYQPYASPVSFAPHSSVKYEGSERLASSSTIDPVGGVSDAAAASTTSPPDPSMEDADFSETMRYISQILMEENFEQKPSMFYDPLSLQVTEKSFYDALRKDHPLSPDQHPLDVHQNLDSTDDNCCGSSIDGVNNRSSINNSQDANKPSSSDASFFGDYASQLNFQPISEKPSQPPSAYTNMSDGFSDVDSSFTRIMAQNIFTDAESVSQFKRGLEEASKFLPKGLQLVTGLDRNNGLPESMGVAKKAVGNIRENSYGLKGRKNHEREASDTEEGRSNKHSAVYVDESDISEMFDKVLLSVENVPLCEEHHVWMQNGTDKAKKPIEYPNSSNGVKTRGRRQGRKKETVDLRTLMALCAQAVSANDCRTANELLKQIRQHSSQLGDASQRLAHYFANGLEARLSGFGTGTQIFYASLSSKRISSANILRAYSVLISVCPFRKFAYFFANKTIMEAAEKAETLHIIDFGIQYGFQWPILIKFLSKRAGGPPKLRITGIELPQVGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKIERNELLAVNCMLRLKNLLDETIEVKSPRDAVLNLIRKMNPNIFVQSIVNGSYNAPFFASRFKEALFHYSAMYDMFDTVIPRENEWRLMLEREFLGREIMNVVACEGVERVERPETYKHWQVRNTRAGFRQLPLSDEIMVKFNEKFKAWYHRDFVIDEDHNWMLQGWKGRIIYASTCWVPS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0123 778 Pfam GRAS domain family 402 775 IPR005202 -
Lele32g0123 778 MobiDBLite consensus disorder prediction 372 396 - -
Lele32g0123 778 Coils Coil 420 440 - -
Lele32g0123 778 MobiDBLite consensus disorder prediction 152 180 - -
Lele32g0123 778 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 325 769 IPR005202 -
Lele32g0123 778 MobiDBLite consensus disorder prediction 80 104 - -
Lele32g0123 778 ProSiteProfiles GRAS family profile. 392 776 IPR005202 -
Lele32g0123 778 MobiDBLite consensus disorder prediction 309 330 - -
Lele32g0123 778 MobiDBLite consensus disorder prediction 80 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0123 Lele-ChrLele32 700660 702996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0123 113 778 GRAS Transcription Factor Family AT1G07530 50.141 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele32g0123 GRAS 2.7e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0130 29 727315 729627 Lele32g0123 32 700660 702996 hybridization