Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0122 ATGGATACTCTTCTGGAAAACTTTCCTGGTGGCCTAAATGGATTTAGATTTGAAAATGGTCGTATTTCTGAATTTCCAAACCAGAACCCCATAAACGGGTTTACGCATGACGATAAATCCGACGTTTCGCCCTTCTTTCCTACCAATTCAGGAATTCATAGCGAGTCGGGTCATTCTTCTAGCACTAGCACGAACGAAGAATCGGCAGACAGTAACAAATATTCCAATCCGGCTCTCAGATTCATAAGTGAAATCCTCTTGGATGAAGAAGATGACCTGGAGCGCAAGCCTTGCATGTTGCAAGATTGCTTAAAACTCCGGGCTGCTGAAAAATCTTTCTACGATGCCCTCGGTCGTAGTTACCCCTCTTCTCCGCGCCAAATCTCTGATTGCTTCCATGGTGAGAACCCCGATAGCCCAGATGATCAAAACTCCTTTCCTACCCATAGTTTCGAGAGCAGCAGCAGCTATACCACTGATAATACATCTGACTCCGATTGGGTGAACAGTGTTGTTAATTCCCCAGAAAATATCCTTGATATCTCAGATATGCCTCCCGATCTACACGGAGGGACCCTTGATCGGAGCAATCTGCAGCTAAATATAGGGAATTCGGTGCGCAATTCAGGATCCAGAGGAACTCGGGAAAAGAGAACCCATCGAATGGGTGATTCTACGAACGAAGAAGAGGGCAGAGGCAGCAAACTTTCTGCTGTCAGTTCAAATGATTCAGAGCCAACGGAAATGTTTGATGAAGTACTTCTCTGTAAACTCAAAACTAGTGCATCCTCGTCACGGGGCCCTGGACCATCTCAAAATGGCACATTCCATCTGAATATTGACTCTGGGGGATCAAACGGGAAGGCAGCGCGTTCAAAGAAAGGGTCTAACAAAGGGACAGCAGTAGATTTGTGGACTCTACTAACCCAATGTGCCCAAGCTGTTGCAAGCTTTGACCAAAGGAATGCCAATGAGCTTCTCAAGCAGATTAGGCTGCATAGTTCACTTTTTGGCGATGGGCTCGAACGTTTAGCTCATTACTTTGCCAATGGTCTTGAGACGCGTTTGGCTGCTGGGACACCATCATATATCCTCCTTAATGACAATGGAGCAACTGCTGCTGAGATGTTAAAAGCTTACAAACTGTACATCACAGCGTCTCCTTTCCTCAGGATCTCAAATTTCTTGGCTAACAGAACAATTCTGAAGCTGGTAGAAGGTGAAAATAGCCTTCACATTATTGATTTTGGCATTTGCTATGGTTTTCAATGGCCCTGCCTTATCCAGCGTCTTTCAGAAAGACAAGGTGGTCCTCCCAAGCTTCGTATCACAGGAATTGAGTTTCCTCAATCAGGTTTTCGGCCTGCAGAGAGGATTGAGGAGACAGGACGAAGGTTAGCAAACTACTGCAGGAGGCTCAACGTCCCTTTCGAGTACAATTGCTTGGCACAGAATTGGGAAACCATCCAACTGGAGGATCTCAAGATGGACAGAACTGAAATAACGGTGGTTAACTGTTTGTACAGATTGAAGAACCTGCCTGATGAAACTGTGTCCGTGAACAGTCCAAGGGATGCTGTTTTGAAGCTGATAAGGAAGATAAACCCGAGTATGTTCATACATGGCGTTGTCAACGGCACCTACAATGCCCCATTTTTCGTCACTCGGTTCAGGGAGGCACTGTTCCATTACTCATCTTTGTTTGACATGTTTGAGGCCAATGTGCCCCGGGAAGATACAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCTATGAATGTTATAGCGTGCGAGGGGGCAGAAAGGGTGGAGAGGCCAGAGACTTACAAGCAGTGGCAGATTAGGAATCGTAGATCCGGGTTCAAGCAACTCCGCTTTGACGCACAAATCTTTAATAAAGCTCAAGAAATGGTGAAGACCGAATATCACAAGGACTTTGCGGTGGATGAGGATAGCAGGTGGGTTTTGCAGGGATGGAAAGGGCGTATCATTCATGCCCTTTCTATCTGGAAGCCTGTTTAA 2031 0.4613 MDTLLENFPGGLNGFRFENGRISEFPNQNPINGFTHDDKSDVSPFFPTNSGIHSESGHSSSTSTNEESADSNKYSNPALRFISEILLDEEDDLERKPCMLQDCLKLRAAEKSFYDALGRSYPSSPRQISDCFHGENPDSPDDQNSFPTHSFESSSSYTTDNTSDSDWVNSVVNSPENILDISDMPPDLHGGTLDRSNLQLNIGNSVRNSGSRGTREKRTHRMGDSTNEEEGRGSKLSAVSSNDSEPTEMFDEVLLCKLKTSASSSRGPGPSQNGTFHLNIDSGGSNGKAARSKKGSNKGTAVDLWTLLTQCAQAVASFDQRNANELLKQIRLHSSLFGDGLERLAHYFANGLETRLAAGTPSYILLNDNGATAAEMLKAYKLYITASPFLRISNFLANRTILKLVEGENSLHIIDFGICYGFQWPCLIQRLSERQGGPPKLRITGIEFPQSGFRPAERIEETGRRLANYCRRLNVPFEYNCLAQNWETIQLEDLKMDRTEITVVNCLYRLKNLPDETVSVNSPRDAVLKLIRKINPSMFIHGVVNGTYNAPFFVTRFREALFHYSSLFDMFEANVPREDTERLWFEKGIFGRDAMNVIACEGAERVERPETYKQWQIRNRRSGFKQLRFDAQIFNKAQEMVKTEYHKDFAVDEDSRWVLQGWKGRIIHALSIWKPV 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0122 676 MobiDBLite consensus disorder prediction 26 73 - -
Lele32g0122 676 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 227 664 IPR005202 -
Lele32g0122 676 MobiDBLite consensus disorder prediction 211 231 - -
Lele32g0122 676 MobiDBLite consensus disorder prediction 194 210 - -
Lele32g0122 676 ProSiteProfiles GRAS family profile. 295 674 IPR005202 -
Lele32g0122 676 MobiDBLite consensus disorder prediction 261 296 - -
Lele32g0122 676 MobiDBLite consensus disorder prediction 138 177 - -
Lele32g0122 676 Pfam GRAS domain family 306 674 IPR005202 -
Lele32g0122 676 MobiDBLite consensus disorder prediction 125 244 - -
Lele32g0122 676 MobiDBLite consensus disorder prediction 261 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0122 Lele-ChrLele32 694706 696736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0122 1 676 GRAS Transcription Factor Family AT2G29060 44.206 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele32g0122 GRAS 4.9e-115 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0129 29 722532 724565 Lele32g0122 32 694706 696736 hybridization
Lele30g1273 30 15276938 15279274 Lele32g0122 32 694706 696736 hybridization