Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0106 ATGGCGTTCACCAAAACGGCAGGTCCCGCCCAGGCGGCCCAAAACCCTTCTCAACCGGCGAAACTACGGTGGGGAGAACTAGATGAGGATGACGGCGAGGATCTTGATTTTTTGCTGCCGCCGCGACAGGTGATTGGCCCGGATGAGAACGGCATAAAGAAGGTGATCGAGTACAAATTCAACGAAGATGGCAATAAGGTGAAGATCACTACCACCACTCGCACTCGCAAGCTCGCTAACGCTCGCCTCAGTAAGCGGGCCATTGAGAGGCGATCCTGGGCCAAGTTCGGCGATGCCGTTCACGAGGATGTTGGTAGCAGGCTTACTATGGTGTCCACCGAAGAGATCCTCCTTGAGCGACCTAGGGCTACAGGTAGCAAACAAGAAGAACAGAAGGTTGCTGGAGACCCGTTGGCTCAATTCCAAAAAGGTGCTGTTCTCATGGTTTGTAGAACTTGTGGGAAAAAGGGAGACCATTGGACTTCAAGGTGTCCATACAAGGATCTTGCCCAGCCAATGGAAGGATTCATTGATAAGCCTGCTGCATCAGAAGCTGCCAACACCGCGTCTGGTCCAACCAAGGGAGCATATGTTCCTCCTGGTCTGAGAGCAGGTGCAGAGAGAACTGGTGGATCAGATATGCGGCGACGGAATGATGAAAATTCTTTGCGGGTCACTAATCTATCTGAGGATACAAGAGAGCCTGACTTGCTTGAACTATTCCGTCCATTTGGTGCTGTAAGCAGAGTCTATGTTGCTGTTGATCAAAAGACTGGCATTAGCAGAGGATTTGGCTTTGTTAACTTTGTGAACAGGGAAGACGCCCAGAGAGCAATTAACAAACTGAATGGATATGGTTATGACAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGACCGAACTAA 909 0.5017 MAFTKTAGPAQAAQNPSQPAKLRWGELDEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFNEDGNKVKITTTTRTRKLANARLSKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRATGSKQEEQKVAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPMEGFIDKPAASEAANTASGPTKGAYVPPGLRAGAERTGGSDMRRRNDENSLRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRPN 302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0106 302 CDD RRM_eIF3G_like 222 297 IPR034240 -
Lele32g0106 302 SUPERFAMILY RNA-binding domain, RBD 219 301 IPR035979 GO:0003676
Lele32g0106 302 Gene3D - 179 302 IPR012677 -
Lele32g0106 302 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 28 298 - -
Lele32g0106 302 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 21 301 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lele32g0106 302 MobiDBLite consensus disorder prediction 182 219 - -
Lele32g0106 302 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 223 289 IPR000504 GO:0003723
Lele32g0106 302 Pfam Eukaryotic translation initiation factor 3 subunit G 43 169 IPR024675 -
Lele32g0106 302 SMART rrm1_1 222 295 IPR000504 GO:0003723
Lele32g0106 302 PIRSF Transl_init_eIF-3_RNA-bind 13 302 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lele32g0106 302 FunFam Eukaryotic translation initiation factor 3 subunit G 185 302 - -
Lele32g0106 302 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 221 299 IPR000504 GO:0003723
Lele32g0106 302 CDD eIF3G 50 168 IPR024675 -
Lele32g0106 302 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele32g0106 Lele-ChrLele32 608972 612061 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0106 20 301 Eukaryotic Initiation Factors Gene Family AT3G11400 69.010 1.12e-154 433