Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0104 ATGGTTATGCTTGTGGAAGTTGTTGGTGGTTTGAAAGCCAACAGCCTAGCTGTTATCAGTGATGCTGCGCATTTGCTTTCGGATATTGTTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCATCAAGTTGGGAGGCAACTCCACATCAGTCTTTCGGATACAACCGGCTCGAGGTTCTGGGTGCTCTTCTTTCTGTGCAGTTTATTTGGCTAATATCTAGCTTTTTAATATATGAAGCACTCGGCAGACTTCTTTACATAAAGACCAGGGTGAATGGCATCCTCATGCTTTCAATTGCAGCATTTGGGTTTGTTCTTAACTTAATTATGGTTTTATGGCTTGGTCATGATCACAGTCATCACAACCATCACCATCACCATCACCATCATGGCTGTGGGCACTCTAATCATGATCATGGAAAGGAGGAGCAGCATAATAACATAACAGATGAAGAGGAGCTCAGTCTAGTTTCAAGTAGCCCTAGAAAAAGAAATGTACTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATTCAATCTGTCGGGGTGATCATTGCCGGCGCTGTAATATGGGTTAAACCAGATTGGTTAGTGGTTGACCTGTTGTGTACTCTAATATTCTGCGTTGTATCTCTGGGAACTACAGTGTCAATGCTCAATAATATTTACGGCATTCTGATGGAGAGGACGCCAAGTGAGATCGATATCATGAAGCTGGAAAATGACCTCAAGGGTATCAAGGGAGTGCAAGATATCCACGACTTGCACATTTGGACCATAACTGTTGGGAAAAATATTCTGTCTTGTCATGTGGTGGCCGAGCCTGGGATCAGTTCCCCTGATTTGCTCAACAGGATTGGGCATTACTGTGAAAAAGCACACAAAATTCATCATGTAATTATACAAATTGAATAA 930 0.4258 MVMLVEVVGGLKANSLAVISDAAHLLSDIVGFSISLFAVWASSWEATPHQSFGYNRLEVLGALLSVQFIWLISSFLIYEALGRLLYIKTRVNGILMLSIAAFGFVLNLIMVLWLGHDHSHHNHHHHHHHHGCGHSNHDHGKEEQHNNITDEEELSLVSSSPRKRNVLNINLQGAYLHVMADLIQSVGVIIAGAVIWVKPDWLVVDLLCTLIFCVVSLGTTVSMLNNIYGILMERTPSEIDIMKLENDLKGIKGVQDIHDLHIWTITVGKNILSCHVVAEPGISSPDLLNRIGHYCEKAHKIHHVIIQIE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0104 309 Pfam Cation efflux family 2 231 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele32g0104 309 MobiDBLite consensus disorder prediction 124 157 - -
Lele32g0104 309 TIGRFAM CDF: cation diffusion facilitator family transporter 2 309 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele32g0104 309 SUPERFAMILY Cation efflux protein transmembrane domain-like 2 233 IPR027469 -
Lele32g0104 309 MobiDBLite consensus disorder prediction 135 150 - -
Lele32g0104 309 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 236 309 IPR036837 -
Lele32g0104 309 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 2 309 - -
Lele32g0104 309 Gene3D Cation efflux protein transmembrane domain 1 231 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0104 Lele-ChrLele32 600186 601115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0104 1 309 Inorganic Solute Cotransporters AT2G29410 51.780 2.54e-103 305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0104 29 626906 628060 Lele32g0104 32 600186 601115 hybridization
Lele30g1291 30 15372339 15373499 Lele32g0104 32 600186 601115 hybridization