Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0096 ATGGGAGGCCGTTGCTCAAAATTCTCACTATGCTGGTGGTCCTCTAATATCAAATCAAATCTTCATGATTTGTCTGACAATGATGATAGGAATAAGAATGAGAAGCCTGGAATCATAGAATATAGCTTGGATCAACTAAGAAGTGCCACTTCAGGATTTTCACCAGACAACATTGTGTCAGAGCACGGTGAGAAAGCTCCCAATGTTGTCTACAGAGGGAAGCTTGAAGATGACGGGTGGGTTGCTGTGAAGCGCTTCAACAGGTCGGCTTGGCCTGATTCTCGACAATTCCTGGAGGAAGCGCGAACAGTGGGGCAGCTGCGGAATGAGCGATTAGCCAACTTGATTGGGTGTTGCTGCGAAGGGGAAGAGAGGCTGCTTGTTGCTGAGTTTATGCCCAATGAAACTCTCTCCAAACACCTTTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGAGTGGCCTTTTACTTAGCACAAGCTTTGGAATACTGCAGTAGCAGAGGAAGGGCATTATACCACGATCTTAATGCTTATAGAATTCTGTTTGATCAGGATGGTAATCCCAGACTCTCCTGTTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGTTATAGTACAAACTTAGCCTTCACCCCTCCAGAGTACCTCAGGACAGGGAGGATTACCCCAGAAAGTGTTATATACAGTTTTGGCACCCTTTTGCTTGATCTTCTCAGTGGCAAACATATTCCACCGAGTCATGAGACACGATCCTTTCACATGCAGGCACTTGATCTCATGCGGGGGAAGAACTTTTTGATGCTCATTGATTCATGTTTGGAAGGCCATTTTTCAAGTGATGATGGAACTGAATTAGTGAGATTAGCTTCACGTTGTTTACAGTATGAAGCTCGTGAGAGGCCTAATGCCAAGTCACTCGTTACTGCTCTAGCTCCTCTACATAAAGAAACTTCTGTACCGTCAAAAGTTTTGATGGGCATACCAGATGGGATTGCATCAACAAGGGAAACAGTTTCATTGACACCTTTTGGCGAAGCTTGTTCTAGAAGAGACTTCACTGCGATACATGAAATTTTGGAAAAGGTTGGGTACAAGGACGATGAAGATGTTGCAAATGAGCTTTCATTCCAAATGTGGACGAATCAAATACAAGAAACTTTGAATTCTAAGAAGCAAGGAGATGCTGCTTTTCGTGCCAAAGACTTCTCTGCGGCCATTGACCATTATACACAATTCATCGATGTAGGGACTATGGTATCGCCAACTGTGTATGCCAGGCGTTGCTTATGTTACTTGATGAACGACATGGCTCAAGAAGCTCTTGGAGATGCCATGCAAGCCCAATCAGTGTCACCCACGTGGCACACTACCTTCTATCTTCAAGCAGCTGCCCTCTTCAGCCTTGGAATGGACAATGATGCACAGGAAAGTCTTAAAGATGGCACAATGCTTGAAACCAGAAAGCATAGAAATTGA 1491 0.4467 MGGRCSKFSLCWWSSNIKSNLHDLSDNDDRNKNEKPGIIEYSLDQLRSATSGFSPDNIVSEHGEKAPNVVYRGKLEDDGWVAVKRFNRSAWPDSRQFLEEARTVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVAFYLAQALEYCSSRGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHETRSFHMQALDLMRGKNFLMLIDSCLEGHFSSDDGTELVRLASRCLQYEARERPNAKSLVTALAPLHKETSVPSKVLMGIPDGIASTRETVSLTPFGEACSRRDFTAIHEILEKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDAAFRAKDFSAAIDHYTQFIDVGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSVSPTWHTTFYLQAAALFSLGMDNDAQESLKDGTMLETRKHRN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0096 496 Gene3D Transferase(Phosphotransferase) domain 1 133 333 - -
Lele32g0096 496 ProSiteProfiles Protein kinase domain profile. 56 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0096 496 SUPERFAMILY TPR-like 393 492 IPR011990 GO:0005515
Lele32g0096 496 FunFam probable serine/threonine-protein kinase At4g35230 389 496 - -
Lele32g0096 496 Gene3D Tetratricopeptide repeat domain 389 495 IPR011990 GO:0005515
Lele32g0096 496 FunFam probable serine/threonine-protein kinase At4g35230 28 131 - -
Lele32g0096 496 SUPERFAMILY Protein kinase-like (PK-like) 33 317 IPR011009 -
Lele32g0096 496 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
Lele32g0096 496 FunFam probable serine/threonine-protein kinase At5g41260 133 332 - -
Lele32g0096 496 Pfam Protein tyrosine and serine/threonine kinase 70 315 IPR001245 GO:0004672|GO:0006468
Lele32g0096 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 495 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0096 Lele-ChrLele32 565963 569434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0096 20 316 Glycoside Hydrolase AT3G07070 32.692 7.16e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele32g0096 PK_Tyr_Ser-Thr 2.7e-26 CL0016