Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0090 ATGAGGAAGCCGGAGTCTGGAAAAAACAACAACTTCAATAACAAGCTTAGGAAGGGGCTGTGGTCACCGGAAGAAGATGACAAGCTCATGAACTACATGCTAAACAATGGACAAGGTTGTTGGAGTGATGTCGCCAGGAATGCTGGCTTGCAAAGATGTGGCAAAAGTTGTCGCCTTCGCTGGATCAATTACTTGAGGCCTGATCTTAAGCGTGGTGCTTTCTCTCCCCAGGAAGAAGAACTTATCATCCATCTTCACTCCCTTCTCGGCAACAGATGGTCCCAAATAGCGGCACGCTTGCCCGGGCGAACCGACAACGAAATCAAGAATTTCTGGAACTCCACAATAAAGAAAAGGCTCAAGCTCATGTCATCAACCACCACCTCTCAAAATGTAAGCGACTCGTCTTCCTTATTATCTGAGCCTAATCTTAAAGACCTCAACAACGTCATGGGAGGTTTCATGCCTATGTTCAACAACAACGTAATTGAGAGATTGCCTATACTCGAGCATGGACTAAACGCGCAAGCAGCTTCTGAAGGATTATTCGACAGTAATAATGGAGGGCGGCCTTGCTTCACGCAAAATAACGGGGTTGACCACAACAATGTTATTAATAATGGTTTTTATGTAGAAAATGGAGTGTTTGGGATTGGGAGTGTAAATATTGGAGCAGAAGTAGGGGAGCTGTTTGTGCCTCCTCTAGAGAGTGTTAACAGCAAGATAACTGATAACCTGCAGAAACTGGAGAATAGAGACACTAACGTTAACAGTTACTTTGATAACATAAACAACATCGTTAATAACTGCAACATTAGCAGCAGCAACAATAATAATAGAGGTGGCGTCGTGGAGAATCTGTTTCAGGAAGAGTTAACTTTGGGAGAGTGGGACTTAGAGGACTTGATGAAAGATATTTCATCCTTTCCCTTTCTTGATTTTTCAAGGCGCAGATCAGATTCAAAGATTACTAGTCGATCGGTAGCTAGGTCTGAAATAAAGATCATATCATCATACCTGTGTATATATACACGGTGA 1038 0.4287 MRKPESGKNNNFNNKLRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKLMSSTTTSQNVSDSSSLLSEPNLKDLNNVMGGFMPMFNNNVIERLPILEHGLNAQAASEGLFDSNNGGRPCFTQNNGVDHNNVINNGFYVENGVFGIGSVNIGAEVGELFVPPLESVNSKITDNLQKLENRDTNVNSYFDNINNIVNNCNISSSNNNNRGGVVENLFQEELTLGEWDLEDLMKDISSFPFLDFSRRRSDSKITSRSVARSEIKIISSYLCIYTR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0090 345 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lele32g0090 345 FunFam Transcription factor MYB46 72 143 - -
Lele32g0090 345 Gene3D - 72 140 - -
Lele32g0090 345 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Lele32g0090 345 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Lele32g0090 345 SMART sant 70 118 IPR001005 -
Lele32g0090 345 SMART sant 17 67 IPR001005 -
Lele32g0090 345 CDD SANT 21 65 IPR001005 -
Lele32g0090 345 FunFam MYB transcription factor 15 71 - -
Lele32g0090 345 Gene3D - 15 71 - -
Lele32g0090 345 CDD SANT 73 113 IPR001005 -
Lele32g0090 345 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Lele32g0090 345 PANTHER MYB DOMAIN PROTEIN 55 13 238 - -
Lele32g0090 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lele32g0090 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Lele32g0090 345 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0090 Lele-ChrLele32 528103 530322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0090 1 311 MYB Transcription Factor Family AT5G12870 48.137 2.40e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele32g0090 Myb_DNA-binding 4.1e-12 CL0123