Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0081 ATGGGCTCAATGAACTCAAACAACTGGCTTTCCTTCCCTCTTTCCCCTACTCAGTCTTCCTTACCTCCACAGATCCAAGCCACTCAATCCCATCAATTTTCTCTTGGCTTAGTCAATGATTCCATGGAAAACCCATTCCAAAACCACGATTGGAATCTGATGAATACACACAGCAGCAACGTTAATGAAGTTCCGAAGGTTGCAGACTTTCTAGGAGTGGGAAAGTCTGAGAATCAGTCAGATCTTGCAGCCTTTAATGAAATTCAGTCAAATGATTCGAGCTACCTATTCACAAACAGCAGTCTGGTGCCGATGCAAAGCTCAGTGGTGGCCACATCTGGCAACTTCGAGTATCAAGAAAACAATGCTAACTCTAACTTGCAGTCTTTGACATTATCCATGGGCAGTGGTAAGGATTCTACCTGTGAAACTAGTGGCGACAACAGTACTAATACTGCAGTGGAAGCTGCTGCACCTCGAAGAACTCTAGACACATTCGGTCAGAGAACTTCAATTTATCGAGGTGTAACCAGATGGACTGGAAGATATGAAGCTCATCTTTGGGACAATAGTTGTAGAAGGGAAGGACAATCACGAAAGGGACGCCAAGGTGGATATGACAAAGAAGAGAAAGCAGCTAGGGCCTACGATTTAGCAGCACTAAAGTACTGGGGAACATCCACAACTACCAACTTTCAAATCAGTAACTATGAGAAGGAACTGGAGGAAATGAAGCACATGACAAGACAAGAGTTTGTTGCCGCCATACGAAGGAAGAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCATCATCAACATGGGAGATGGCAGGCAAGGATAGGTAGAGTTGCGGGAAACAAAGATCTTTACTTGGGAACTTTCAGCACTGAGGAAGAAGCTGCAGAAGCATACGACATAGCGGCGATCAAGTTCAGGGGACTAAATGCGGTGACAAACTTCGACATGAGCCGTTACGATGTGAAAGCTATACTTGAGAGCAACACGCTTCCAATCGGAGGAGGAGCTGCTAAACGACTGAAGGAAGCTCAAGCTCTGGAATGTTCGAGAAAAAGAGAGGAAATGATAGCACTGGGATCAAGCTTTCAGTACGGCAGCGGCAGTGGCGTAGGGGGCAGCTCTAGCAGGCTTCAACTACAAGCCTACCCACTGACGCAGTTGGATCAGACTCAACCATTGTTAAGCCTGCAGAACCAGGAGATATGTCAGTACTCGTCCCTTCATCATCCCAGTTATATCCAAACCCAGCTTCAGTTGCACCATCAAACTGGTTCTTCTAACTACAACTTTCACCAATCACCCAGCAATAACGCTCAGTTGTATAATAGCTATCTTCAGAACCACCCGGCTCTGCTTCAGGGTTTGATGAACATGGGTTCTTGTTCTTCTTCTGTGATGGACAATGATGGAGGGTCTAGTGGGAGTTACAGTGGAGGAGGAGGGTTTATGGGCATGGCTTCCAATACAACGTCGGTGGGATCCGCGGAGGAGCTGGCGCTGGTGAAGGTTGAGAACTACAATATGCCTTCCGGTAGTTACGGCGGCGGCTGGCCGTCGGAGTCCATGCAGGGATCCAATGCTGCTCTCTTTACAATGTGGAATGATTGA 1644 0.472 MGSMNSNNWLSFPLSPTQSSLPPQIQATQSHQFSLGLVNDSMENPFQNHDWNLMNTHSSNVNEVPKVADFLGVGKSENQSDLAAFNEIQSNDSSYLFTNSSLVPMQSSVVATSGNFEYQENNANSNLQSLTLSMGSGKDSTCETSGDNSTNTAVEAAAPRRTLDTFGQRTSIYRGVTRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFQISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSSFQYGSGSGVGGSSSRLQLQAYPLTQLDQTQPLLSLQNQEICQYSSLHHPSYIQTQLQLHHQTGSSNYNFHQSPSNNAQLYNSYLQNHPALLQGLMNMGSCSSSVMDNDGGSSGSYSGGGGFMGMASNTTSVGSAEELALVKVENYNMPSGSYGGGWPSESMQGSNAALFTMWND 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0081 547 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 66 417 - -
Lele32g0081 547 SUPERFAMILY DNA-binding domain 268 329 IPR016177 GO:0003677
Lele32g0081 547 Pfam AP2 domain 270 319 IPR001471 GO:0003700|GO:0006355
Lele32g0081 547 Pfam AP2 domain 173 225 IPR001471 GO:0003700|GO:0006355
Lele32g0081 547 SMART rav1_2 269 333 IPR001471 GO:0003700|GO:0006355
Lele32g0081 547 SMART rav1_2 172 239 IPR001471 GO:0003700|GO:0006355
Lele32g0081 547 FunFam AP2-like ethylene-responsive transcription factor 268 329 - -
Lele32g0081 547 CDD AP2 171 235 IPR001471 GO:0003700|GO:0006355
Lele32g0081 547 ProSiteProfiles AP2/ERF domain profile. 172 233 IPR001471 GO:0003700|GO:0006355
Lele32g0081 547 Gene3D AP2/ERF domain 172 235 IPR036955 GO:0003700|GO:0006355
Lele32g0081 547 Gene3D AP2/ERF domain 269 329 IPR036955 GO:0003700|GO:0006355
Lele32g0081 547 CDD AP2 268 329 IPR001471 GO:0003700|GO:0006355
Lele32g0081 547 SUPERFAMILY DNA-binding domain 171 235 IPR016177 GO:0003677
Lele32g0081 547 ProSiteProfiles AP2/ERF domain profile. 269 327 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0081 Lele-ChrLele32 477427 480110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0081 4 547 AP2-EREBP Transcription Factor Family AT3G20840 64.094 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele32g0081 AP2 1.7e-05 CL0081