Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0080 ATGGAATCTTCAACTCCCCTCCCGCCGGAGATCCACCTCAACAACCTTAGGGCACTCAAAGTCCTCGGTAAGGGTGGCATGGGCACTGTCTTCCTCGTCCACGACACCTCAACCGATCCCTCTGCACACTTCCCCTTCGCCCTCAAGGTCCTCGACAAATCCTCCATCAATTCCCACCACACCACCCTCGACGCCGACCGCCGTGCCCGCTGGGAAATCCAGGTCCTCACTCGTCTCTCCCACCCCTTCCTCCCTTCCATTCTCGGAACCACAGAGTCCGACCATCTTCTCGGTTGGGCTCTTCCTTATTGCCCCGGTGGTGATCTTCACGTCCTCCTTCACCGCCAAGTTGATCGGGTGTTCTCCCCCGCTGTCATTCGCTTCTATTTGGCAGAGATCCTCTGCGCCGTGGACCATCTTCACGGCATTGGCATCGCCTACCGCGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCGGGCCACGTCACTCTCACCGACTTCGATCTCTCTCATAAGCTCAAACCCAAATCCATCAGAACGGTCATTTCGTCAACACCAGCTCAAGACAATTTCCCAGAAATCCGCCGGAAAAATCGCCGGAATTTGACTCGATGGTTCCCCACCGCAACGGAGAACAGGAAGGGGCCGAAGAAGGCGAAGTCCGCCCGAGTCAGCCCGGTGAGTCGACGGAAACCGAGTTTCTCCAGTGGTGAGAAGTCTAACTCGTTTGTGGGCACGGAAGAGTACGTATCCCCGGAGGTAGTGCGCGGCGACGGTCACGAGTTCGCCGTCGATTGGTGGGCCTTGGGAATATTAGCTTACGAGATGTTATACGGTACGACGCCGTTCAAGGGGAGTAACCGGAAGGAAACTTTTCGGAATGTTCTGTTGAAAACACCGGAATTCATAGGAAAGCGGACGGTACTAACGGATTTGATTGAGCGGTTACTGGAGAAGGATCCCACAAAGCGGTTGGGTTACGCGCGAGGCGCGTGCGAGATCAGGGAGCACGAGTTCTTCAGAGGGGTACAGTGGGACCTACTAGCGGAGGTAGTAAGGCCGCCGTTCATTCCGCCGAGAGAGGAGGGCGTCGACTTCACTGCCAGAGGTACGGACATAACGGATTATTTCCGGAGACTGAAATCGCCGCCGTCATTCCCCGCATCGCCGTCTTCTGAGTATCAGAGGAATATCTCGTACGGAGAATTTTGA 1215 0.558 MESSTPLPPEIHLNNLRALKVLGKGGMGTVFLVHDTSTDPSAHFPFALKVLDKSSINSHHTTLDADRRARWEIQVLTRLSHPFLPSILGTTESDHLLGWALPYCPGGDLHVLLHRQVDRVFSPAVIRFYLAEILCAVDHLHGIGIAYRDLKPENVLIQQSGHVTLTDFDLSHKLKPKSIRTVISSTPAQDNFPEIRRKNRRNLTRWFPTATENRKGPKKAKSARVSPVSRRKPSFSSGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYEMLYGTTPFKGSNRKETFRNVLLKTPEFIGKRTVLTDLIERLLEKDPTKRLGYARGACEIREHEFFRGVQWDLLAEVVRPPFIPPREEGVDFTARGTDITDYFRRLKSPPSFPASPSSEYQRNISYGEF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0080 404 Gene3D Phosphorylase Kinase; domain 1 16 107 - -
Lele32g0080 404 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
Lele32g0080 404 Pfam Protein kinase domain 19 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0080 404 Pfam Protein kinase domain 236 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0080 404 FunFam Serine/threonine-protein kinase OXI1 108 176 - -
Lele32g0080 404 PANTHER FLIPPASE KINASE 1-RELATED 11 366 - -
Lele32g0080 404 Gene3D Transferase(Phosphotransferase) domain 1 108 187 - -
Lele32g0080 404 Gene3D Transferase(Phosphotransferase) domain 1 238 360 - -
Lele32g0080 404 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0080 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lele32g0080 404 SUPERFAMILY Protein kinase-like (PK-like) 13 393 IPR011009 -
Lele32g0080 404 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lele32g0080 404 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0080 404 MobiDBLite consensus disorder prediction 206 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0080 Lele-ChrLele32 465162 466376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0080 11 404 AGC Kinase Gene Family AT3G20830 58.151 2.25e-157 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele32g0080 Pkinase 7.9e-30 CL0016