Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0077 ATGGAGTCAGATCTTAAGCAGCACTCTTCAATGTTACATGATTATCAGCAGCAGCAGATGAATTCTTCTGGTTTGATGCGGTATCGATCGGCGCCAAGCTCGTATTTTACGAATATCATAGACAAGGAATTTTACGAGGACATGTTCAATCGGCCTTCCAGCCCCGAAACAGAGCGAATTTTTTCACGGTTTATGAACAGCCTTGCTAATGAGTCAGAGGACGCACCGGCTCAATATCTTTCATCTGTTCGACAACATTCTACAGTGAAGGAAGAAGAGATGGACCAGCAGTCTCAGGCTATGCCCCCCGTGAACAATGAACCGGGGGCTATCCACCACCAGCAGCAGAACATTATTAGTAATTTTGTTTCTGCTCCGCAGAATCTTTTCCAAAGCTCAGGGCGTCCACAGAGCTTGACTTCATCAACTATGGACGGAGTCTATTCGAGGGGTAGTCATCTGCCACATTTGAAGGCTCCTGATGCAAATAATTCCAATCTAATCAGGCACAATAGCTCACCTGCAGGACTCTTCTCCACTATAAACGTTGAAAGCTATACTTCTATGAGAAGCACAGGCATATTGGGAGCTGGTACTAACACTAGCGAAGAGGCAAGCTTCTCTTCTGCGTTGAGGATGAAAAATCCGCCAAAATACTTGACAGGCGTAATGTCATCCATAGCTGAAGTTGGGGACAAAGGCGACACAGAACATAATCAAGACATTGAATCTTTTGCTGAAAGCCAAGGTAATGAGTTTATCACAAGTTTTCCCCCTTGGGACGATTCCGTACCCATTTCTGACAAAACTGCTGGACTCAAAAGATTTAGAGACGAGGATACAAAAACATTTTCTGAGACTCAGGTTAGGAGAACTAAGATCAGTGAGCGTATGAGGAAACTTCAAGACCTGGTCCCCAACATGGACAAACAAACAAACACAGCAGACATGTTGGACTTGGCTGTCCACTACATTAAAGACCTTCAAAAGGAGGTTGAGTCACGCGAAGTGCACGTGTCCATACAAGGAGGGGCAGTAATGGAAAAGGATGAAAGGGGGGGGGGGGAAGAGATACAACTGCATCATTGTACAGATTTGTAA 1101 0.4496 MESDLKQHSSMLHDYQQQQMNSSGLMRYRSAPSSYFTNIIDKEFYEDMFNRPSSPETERIFSRFMNSLANESEDAPAQYLSSVRQHSTVKEEEMDQQSQAMPPVNNEPGAIHHQQQNIISNFVSAPQNLFQSSGRPQSLTSSTMDGVYSRGSHLPHLKAPDANNSNLIRHNSSPAGLFSTINVESYTSMRSTGILGAGTNTSEEASFSSALRMKNPPKYLTGVMSSIAEVGDKGDTEHNQDIESFAESQGNEFITSFPPWDDSVPISDKTAGLKRFRDEDTKTFSETQVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVHYIKDLQKEVESREVHVSIQGGAVMEKDERGGGEEIQLHHCTDL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0077 366 Pfam Helix-loop-helix DNA-binding domain 290 329 IPR011598 GO:0046983
Lele32g0077 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 278 328 IPR011598 GO:0046983
Lele32g0077 366 CDD bHLH_AtbHLH_like 288 336 IPR045239 -
Lele32g0077 366 SMART finulus 283 334 IPR011598 GO:0046983
Lele32g0077 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 288 336 IPR036638 GO:0046983
Lele32g0077 366 Gene3D - 285 342 IPR036638 GO:0046983
Lele32g0077 366 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 75 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0077 Lele-ChrLele32 449796 452076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0077 1 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 33.250 1.51e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele32g0077 HLH 3.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0079 29 469194 470787 Lele32g0077 32 449796 452076 hybridization
Lele30g1317 30 15532067 15534409 Lele32g0077 32 449796 452076 hybridization