Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0064 ATGGTTGACCTGGGACGCGGAGAGTTCGGAGTGACAGACAGATGCGTGGAGATTGAGACCGGGAAGGCGTTCGCGTGCAAGAAGATCGCCAAGACGAAGCTTCGCACTGAGATTGATATCCAAGATGTGAGGAGAGAGGTGCAGATCATGAGGCATTTGCCAAAGCGTCCTAATATCGTGAGCTTCAAGGAAGCTTACGAGGACAAGGACGCCGTGTATCTCATCATGGAGCTTTGTGAAGGTGGCGAGCGTTTTGACAGAATCGTCTCTAAAGGCCATTACACAGAACGTGCTGCGGCCAATGTTATCAAGACAATTCTTGAGATTTGCAAGGTATGTCATGAACACGGGGTGATACACAGGGACTTGAAGCCTGAAAATTTCTTATTTGGAGATGCAAGTGAGTCTGCTCCAGTGAAGGCAATTGATTTTGGGCTTTCCACCTTCTATGAATCAGGACAGAGGTTTAATGAAATTGTTGGAAGTCCCTACTACATGGCTCCAGAAGTATTGGGACGTAACTATGGACCAGAAATTGATGTGTGGAGCGCTGGCGTAATCCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAATCTGAGGAAGGAATAGCACAGGCCATCATCCGGCGGAACATCGATTTTGAAAGAGATCCTTGGCCTAAGGTTTCAGAAGAAGCAAAAGGCCTAGTTAAAACCATGCTTGATCCAAATCCATACAGCCGATTAAATATTCAAGAAGTTCTTGGTATCCTCCCAATTGAGCAAATAGATCGGATCAAGCAGATGTTACATATGATGGACAAGGATAAAAATGGAAACTTGTCGTTTGAAGAGCTCAAAGATGGTCTTTCTAGAATTGGACATCCTCTTCCTGATCCTGAAGTGCAGATGTTATTGGACGCAATACAGATGGAAATGTCACACTGA 936 0.4498 MVDLGRGEFGVTDRCVEIETGKAFACKKIAKTKLRTEIDIQDVRREVQIMRHLPKRPNIVSFKEAYEDKDAVYLIMELCEGGERFDRIVSKGHYTERAAANVIKTILEICKVCHEHGVIHRDLKPENFLFGDASESAPVKAIDFGLSTFYESGQRFNEIVGSPYYMAPEVLGRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIRRNIDFERDPWPKVSEEAKGLVKTMLDPNPYSRLNIQEVLGILPIEQIDRIKQMLHMMDKDKNGNLSFEELKDGLSRIGHPLPDPEVQMLLDAIQMEMSH 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0064 311 SMART serkin_6 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0064 311 Pfam Protein kinase domain 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0064 311 FunFam calcium-dependent protein kinase 13 84 264 - -
Lele32g0064 311 ProSiteProfiles Protein kinase domain profile. 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0064 311 ProSitePatterns EF-hand calcium-binding domain. 270 282 IPR018247 -
Lele32g0064 311 ProSiteProfiles EF-hand calcium-binding domain profile. 257 292 IPR002048 GO:0005509
Lele32g0064 311 SUPERFAMILY Protein kinase-like (PK-like) 4 257 IPR011009 -
Lele32g0064 311 CDD EFh 261 305 IPR002048 GO:0005509
Lele32g0064 311 Gene3D Transferase(Phosphotransferase) domain 1 84 255 - -
Lele32g0064 311 SUPERFAMILY EF-hand 253 306 IPR011992 -
Lele32g0064 311 FunFam Calcium-dependent protein kinase 1 2 83 - -
Lele32g0064 311 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 303 - -
Lele32g0064 311 Pfam EF hand 262 288 IPR002048 GO:0005509
Lele32g0064 311 SMART efh_1 261 289 IPR002048 GO:0005509
Lele32g0064 311 Gene3D - 256 309 - -
Lele32g0064 311 CDD STKc_CAMK 4 251 - -
Lele32g0064 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Lele32g0064 311 Gene3D Phosphorylase Kinase; domain 1 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0064 Lele-ChrLele32 368806 371268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0064 3 304 EF-hand Containing Proteins AT2G31500 67.151 1.55e-164 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele32g0064 Pkinase 2.1e-69 CL0016