Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0056 ATGGGATTCTCAGTAAGACATTTCTTCATCTCCTTCTTGAATGTGAACCCATGGAAACCTCGGATTTTCTTTGCTCTTTCAGTTCTTTTATCGTGTTCATGCTGGTCTGTTTCTGGTCTGGGTTCCATGTCTTCCATTGCCATCTCTTATGGGGAAAAAGGTTCTGTCTTTTGTGGTCTGAGATCCGATGGGTCTCATACTGTGAACTGTTACGGATCAAACTCAGCCATAGTCTATGGAATACCAACCCATTTCCCACTTCTGGGTCTAACCGCAGGTGATGGCTTTGTCTGCGGACTCCTAATGGATACTTTCCAACCTTATTGTTGGGGTAGCAGTGGCTACATCGAAATGGGTGTTCCACAACCTATGACGAAAGGAGCAGAGTATCTAGAAATCAGTGCTGGGGATTATCATGTTTGTGGATTGAGGAAACCCTTGACAGGAAGACAGCGAAATATTTCTCTTGTCGATTGTTGGGGTTACAACATGACCCAGAACTATGTTTTTGATGGCCAGATTCAATCTATCTCGGCAGGTTCTGAATTCAACTGTGGGTTATTTTCCCAGAACAGAACAGTCTTGTGCTGGGGAGATGACACTAGTAGCAGAGTAATCAATTTAGTTCCTAAAAATAAGAAGTTCCAGAAGATTTCTGCAGGTGGATTTCATGTGTGTGGAATTTTAGAAGGAGTGAATTCCAGAACTATTTGTTGGGGAAGGAGCTTAGGCATTGAGGAAGAAATTGCGGTGGAACGTTCTGGTCAAGGCAACGTTGATTTGGCTCCAAACGAACCTATGCTCTCTGTTGTGGGAGGAAGATTTCATGCTTGTGGCATCAAAACTTATGATCATGGTGTGATTTGCTGGGGTTTTACTATCAAGGGAAGCACCCCAGTTCCGAGTGGGATTAAGGCATTCGAGATTGCTGCTGGGAATTATTTTACTTGTGGAATACTTGCTCAGAAATCTCTTCTTCCTTCTTGTTGGGGTGTTGGATTCCCTACTTCTCTACCATTAGCTGTCTCTCCTGGACTATGCCAGCCTAATCCATGTCCTCCTGATTTCTATGAAATTGAACAGCAAAAGGGTCTGTGCGAGTCCTCGGATTCTCGCTTTTGCATGCCATGCAGTGGAGCTTGTCCTGCTGACATGTATCAGAAAAGTGAGTGCAATTATACATCTGACAGACAATGTGAATACAACTGTTCTCGTTGTTCCTCACCCAAATGCTTCTCCAATTGCTCATTTTCAGATTCCAATGCTAACTTGGAGAAGAAAGATGAGAAATTTTGGTCTTTGCAGTTGCCAGTGATGATTGCTGAGATTGCTTTTGCGGTCTTCTTTGTTAGTCTTGTGACCTTAACTTCTGTTTTATATGTTCGCTACAAGCTACGAGGTTGCAGGTGTTCCATAGAAGGATCAAACGTGAAGAAACTTCATGGCAGCAACTCTTCCCTCCAAAAAGAGAACAGCAAGATCAGTCCAGACTTAGAGGAGCTCAAGATCAGGAGGGCCCAAACATTTACCTATGCGGAACTTGAAAGAGCAATAGGTGGGTTCAAAGAAGAATCCATAGTTGGTAAAGGAAGCTTTTCGTGTGTATTCAAAGGAGTATTGAAGGATGGGACTGTTGTAGCAGTTAAAAGGGCCATAATGTCTTCCAACATGCAAAAGAATTCCAAAGAGTTTCACACAGAACTTGACTTACTTTCCAGGTTGAACCATGCCCATTTACTCAACCTGCTAGGGTATTGTGAAGAAGGCGGAGAAAGGCTTCTTGTTTATGAGTTCATGGCGCATGGTTCCTTGCACCAACATCTCCATGGGAAAAACAAGGCCTCCAAAGAGCAGTTGGATTGGGTTAGAAGGGTCACAATTGCAGTTCAAGCAGCTAGAGGAATTGAATATTTACATGGCTATGCCTGCCCACCTGTGATTCACAGAGACATCAAATCTTCAAACATACTCATTGATGAAGAGCACAATGCTAGAGTTTCTGATTTTGGCTTGTCATTACTGGGTCCTGCCGATAGTAGCTCCCCTTTGGCCGAACTACCTGCAGGGACGCTCGGCTATCTTGATCCTGAATATTACAGACTCCATTACCTTACCACAAAATCTGATGTATATAGCTTTGGCGTGCTGCTCTTGGAAATTCTGAGTGGTAGGAAAGCCATTGACATGCAATACGATGAAGGTAACATAGTTGAATGGGCCGTGCCTTTGATTAAGGCGGGAGATATCACCGCAATTTTAGACCCAGTTCTAAAACCTCCTCCTGATCTGGAAGCCTTGAAAAGGATTGCCAACGTGGCCTGTAAATGCGTGAGGATGAGAGGGAAAGAGAGGCCATCCATGGACAAAGTGACAACTGCTTTGGAGCGAGCTCTGGCACAGCTAATGGGTAGCCCAAGCAACGAGCAGCCGATTTTGCCCACCGAGGTTGTGTTGGGAAGTAACAGATTACACAAGAAATCGTCTCAGAGATCTTCGAACAAGTCAACTTCAGAAACGGACGTGGGAGAAGCCGAGGATCAAGGGTTCGAGTTCAGAGCACCGTCGTGGATAACGTTTCCGAGCGTTACTTCATCTCAAAGAAGGAAGTCGTCGGTGTCGGAGGGGGACGTGGATGGGAAGAATCCAGAAGCGAAGAACTTGGGGAACGTGGGAGGAGGTGGGGACGTGTTGAGGAGTCTAGAGGAAGAGATTGGGCCGGCTTCTCCTCAAGAGAGGCTCTTTTTGCAGCACAACTTTTGA 2760 0.4504 MGFSVRHFFISFLNVNPWKPRIFFALSVLLSCSCWSVSGLGSMSSIAISYGEKGSVFCGLRSDGSHTVNCYGSNSAIVYGIPTHFPLLGLTAGDGFVCGLLMDTFQPYCWGSSGYIEMGVPQPMTKGAEYLEISAGDYHVCGLRKPLTGRQRNISLVDCWGYNMTQNYVFDGQIQSISAGSEFNCGLFSQNRTVLCWGDDTSSRVINLVPKNKKFQKISAGGFHVCGILEGVNSRTICWGRSLGIEEEIAVERSGQGNVDLAPNEPMLSVVGGRFHACGIKTYDHGVICWGFTIKGSTPVPSGIKAFEIAAGNYFTCGILAQKSLLPSCWGVGFPTSLPLAVSPGLCQPNPCPPDFYEIEQQKGLCESSDSRFCMPCSGACPADMYQKSECNYTSDRQCEYNCSRCSSPKCFSNCSFSDSNANLEKKDEKFWSLQLPVMIAEIAFAVFFVSLVTLTSVLYVRYKLRGCRCSIEGSNVKKLHGSNSSLQKENSKISPDLEELKIRRAQTFTYAELERAIGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSSNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNKASKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYDEGNIVEWAVPLIKAGDITAILDPVLKPPPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERALAQLMGSPSNEQPILPTEVVLGSNRLHKKSSQRSSNKSTSETDVGEAEDQGFEFRAPSWITFPSVTSSQRRKSSVSEGDVDGKNPEAKNLGNVGGGGDVLRSLEEEIGPASPQERLFLQHNF 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0056 919 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 351 399 IPR001368 GO:0005515
Lele32g0056 919 MobiDBLite consensus disorder prediction 862 919 - -
Lele32g0056 919 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 24 919 - -
Lele32g0056 919 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Lele32g0056 919 CDD STKc_IRAK 527 796 - -
Lele32g0056 919 FunFam Receptor protein kinase CRINKLY4 599 801 - -
Lele32g0056 919 ProSiteProfiles Protein kinase domain profile. 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0056 919 MobiDBLite consensus disorder prediction 820 847 - -
Lele32g0056 919 SUPERFAMILY RCC1/BLIP-II 255 337 IPR009091 -
Lele32g0056 919 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Lele32g0056 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lele32g0056 919 Gene3D - 87 342 IPR009091 -
Lele32g0056 919 Gene3D Phosphorylase Kinase; domain 1 491 598 - -
Lele32g0056 919 SMART serkin_6 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0056 919 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Lele32g0056 919 FunFam Serine/threonine-protein kinase-like protein CR4 39 206 - -
Lele32g0056 919 MobiDBLite consensus disorder prediction 821 838 - -
Lele32g0056 919 Gene3D Transferase(Phosphotransferase) domain 1 599 809 - -
Lele32g0056 919 SUPERFAMILY RCC1/BLIP-II 40 242 IPR009091 -
Lele32g0056 919 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Lele32g0056 919 FunFam serine/threonine-protein kinase-like protein CCR1 491 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0056 Lele-ChrLele32 335350 338109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0056 26 919 Receptor kinase-like Gene Family AT3G59420 69.623 0.0 1260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele32g0056 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0054 29 318555 321188 Lele32g0056 32 335350 338109 hybridization
Lele30g1337 30 15665444 15668077 Lele32g0056 32 335350 338109 hybridization