Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0036 ATGAATTTTTTTGGCTGCACGGATCATCATCATCAGGACCTTAATATTAATGGTGATGACATGCACAGCAACAACCACACCTCCACCAGCCGTTCTTCCGACTCCGGCGACCCTTCCCACGACTCCAAATGGGCCCCTAAGCTCCTCCGAGAGTGCGCCAGAGCCATTTCCGACGGCGACTCCCCCAGAATCCACCATCTCCTCTGGATGCTCAACGAGCTCGCCTCCCCTTACGGTGACTGCGATCAGAAAATGGCCTCCTACTTCCTCCAGGCCCTCTTCTGCAAAGCCACCGAATCCGGTCCCCGTTGCTACATGACTCTCTCCTCCATCGCCGACAAATCCCACTCCTTCGATTCCGCCAGAAAGTTGATCCTCAAGTTTCAGGAGGTCAGCCCCTGGACAACGTTCGGCCACGTCGCTTCCAACGGCGCTATTCTGGAAGCCCTGGAGGGCGAGACCAAGCTTCACATAATCGACATAAGCAACACTCTATGCACGCAGTGGCCTACCCTGTTGGAAGCCCTGGCCACCCGGAACGACGAAACTCCTCACCTGAAGCTCACCGTCGTTTTGACGGGCGGGACCGGTAGCTTAGGTGCAGGGTCGGTGATGAAGGAAGTGAGGCAGAGGATGGAGAAGTTTGCGAGGCTGATGGGAGTGCCGTTTGAGTTGAAGATGATAAGTGGATTGAATCACCTGGGAGAGCTGACCAAGGAGGGCCTGGGAGTGCAAGAGGAGGAAGCAGTGGCCGTGAATTGCGTCGGCGCGCTGAGAAGAGTGAGAGTGGAGGAGAGAGCAGGGGTGATCGGCATGGTCAGATCGCTGAATCCGAGGGTGGTGACTGTGGTGGAGGAGGAGGCAGATTTTTCGAGCAACAGGAACGAGTTCGTGAAGGGTTTTGAAGAGTGCCTGAGGTTCTTCTCGCTTTACTTTGAGACGCTGGAGGAAAGCTTCGAGGCGACGAGTAACGAGAGACTGATGCTGGAGAGGGAGTGCTCGAGGAGCATAGTTAGGGTTTTGGCATGCGGGGACGATGAGGAGGAGGCCGGAGGAGATCACGAGGAGTGCGAGAGGAGGGAGAGAGGGAGGCAGTGGAGTGAGAGGATGAAGCAGGAGTTTCGGCCAGTGGCCTTCAGCGACGACGTTTTGGATGATGTCAAGGCATTGCTCAAGAGGTACAGATCGGGATGGTCACTGGCGGTGCCTCCTCCGGAAGACGCCACCGGAATTTACTTGAACTGGAAGGAGGAGCCTGTGGTTTGGGCTTCCGCATGGAAACCCTAG 1287 0.5633 MNFFGCTDHHHQDLNINGDDMHSNNHTSTSRSSDSGDPSHDSKWAPKLLRECARAISDGDSPRIHHLLWMLNELASPYGDCDQKMASYFLQALFCKATESGPRCYMTLSSIADKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVLTGGTGSLGAGSVMKEVRQRMEKFARLMGVPFELKMISGLNHLGELTKEGLGVQEEEAVAVNCVGALRRVRVEERAGVIGMVRSLNPRVVTVVEEEADFSSNRNEFVKGFEECLRFFSLYFETLEESFEATSNERLMLERECSRSIVRVLACGDDEEEAGGDHEECERRERGRQWSERMKQEFRPVAFSDDVLDDVKALLKRYRSGWSLAVPPPEDATGIYLNWKEEPVVWASAWKP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0036 428 Coils Coil 312 332 - -
Lele32g0036 428 Pfam GRAS domain family 47 427 IPR005202 -
Lele32g0036 428 MobiDBLite consensus disorder prediction 15 42 - -
Lele32g0036 428 ProSiteProfiles GRAS family profile. 36 427 IPR005202 -
Lele32g0036 428 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 417 IPR005202 -
Lele32g0036 428 MobiDBLite consensus disorder prediction 18 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0036 Lele-ChrLele32 243984 245270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0036 22 428 GRAS Transcription Factor Family AT4G37650 52.719 2.39e-145 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele32g0036 GRAS 3.5e-93 CL0063