Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0021 ATGCTTACGACGCTCTTTCAATTCTACAGTTGTTCCCCTTTAGAGGAAGCTGGAGCAGCGACGTTATTGCGAGTCCAAATGGCAGAGGCATCTATTTCCACAACATGCAGTATGGTTCGTGTGCAAGGTTTAGAAGCATCAATTACAGATTCAAATGGCAATTCGGCAATCTTAAAAAATGCCAAAATCGTTGTAGAATCTGAAGATGGAAATAAGTTACAACTAAGAGTGGACTTGACTGGGAATCAAACGGAAAGGGTCTTTAAACAGGTCCTTACAAATTTAGCTGGCACTGCCCCACCAATTCCAGGATTTCGAAGACAAAAAGGAGAGTCAGATTCAGATGCTAACAGTACGACAAAATGTGATGTATGTAGATTGGCTCTAGCATTTCCTTGTTTTAGTTATCCTTGGTGGGACTACTCTGGTGAACAAGGGGTAGTGATGTGGAAATATCTCTATACTTGGGATAAACGAAAAATAGCAGTAGCCATGATGCGTATGCCAAATTGCCAAGGCGCTTCCTGGGTCCCACCACTCGAGACAGCCTCATCCCACTCGCGCACCCCTGCACGCCTCAGTCACGCTCTGACACCTGCGGGTTTGAGAGAAGAAGGCGTAGATATTAGAAAGATGATGGAACCAAAGAGGAGTCTCTGCTCTGTGGATCAGAGCAATTATACCTCTATTGCATCTAAAAGACACAAGGCTGATTTATCCATCTCCACAAAGGAGGGAAAGGAGAAGATCGGGGAACGAATTGTTGCCTTGCAGCAGCTCGTTTCTCCATTTGGAAAGTCAGATACAGCTTCGGTACTTTTAGAGGCAACTCACTATATAAGGTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAATGCTCTCCTACAAGCAAAACGCAGGATATATACAGCCTGAGGAGTAGAGGATTATGTCTGGTTCCAGTGTCGTATACGATTGGAGTTGCCCAGAGCAATGGTGCAGATATATGGGCCCCCACTAAAAACGCATCGTCACAATTTGACTAG 1038 0.4451 MLTTLFQFYSCSPLEEAGAATLLRVQMAEASISTTCSMVRVQGLEASITDSNGNSAILKNAKIVVESEDGNKLQLRVDLTGNQTERVFKQVLTNLAGTAPPIPGFRRQKGESDSDANSTTKCDVCRLALAFPCFSYPWWDYSGEQGVVMWKYLYTWDKRKIAVAMMRMPNCQGASWVPPLETASSHSRTPARLSHALTPAGLREEGVDIRKMMEPKRSLCSVDQSNYTSIASKRHKADLSISTKEGKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLHKQVKVLSAPYLQCSPTSKTQDIYSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKNASSQFD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0021 345 CDD bHLH_AtbHLH_like 240 291 IPR045239 -
Lele32g0021 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 283 IPR011598 GO:0046983
Lele32g0021 345 FunFam Transcription factor bHLH113 family 233 309 - -
Lele32g0021 345 Gene3D - 232 302 IPR036638 GO:0046983
Lele32g0021 345 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 192 322 - -
Lele32g0021 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 247 298 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0021 Lele-ChrLele32 149158 158397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0021 212 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 56.291 4.55e-50 163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0022 29 153334 156054 Lele32g0021 32 149158 158397 hybridization
Lele30g1372 30 15867685 15870103 Lele32g0021 32 149158 158397 hybridization