Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0018 ATGTGCACCGCTGAAACTCTTACGACCCTGCAATTCTTGACCAGTCATTTCCATTTTGAGATTATGAACCCCTATGCGTTGGATTTGGCCCTGGATTTCCTGGTTCCCTCTTTGTGGGAGATCAAAGTCACAGTTGCCACCTCCATGTTTGTGATAATCGCCTATTGGTTTTTCACGTACAGAACTGGAGACTTTGATGTTGATCGAGTACTTGTTGACAATTCCGGGGATGCTTCTGACGACAAAGACAAGATGGCCCAGTTTAAAGGAGATTCTCAGATCAATTCGGCGTATTTGATCAAGTTGGAACTTTGGGCTGCTAAGAATCTTATTGGTGCAAATTTAAATGGCACGTCAGATCCTTATGCTATCATCACATGTGGCAATGAGAAGAGATTCAGTTCCATGGTTCCTGGTTCAAGAAATCCTATGTGGGGTGAAGAATTCAATTTCTCTGTTGATGAACTTCCTGTCCAGATTAACGTTACGATATATGATTGGGATATTATTTGGAAAAGTGCTGTTCTAGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCGGTATGGTATACATTAGATAGCCCATCAGGGCAGGTTTGCCTTCACATAAAAACAAGAAAACTGTCCACAAATTGTTCCAGGATGAATGGGTATGGCGTACCCAACCCTCGCAGAAGGATGCCTACAGAAAAGCAAGGGCCTACTGTTGTTCATCAAAAGCCAGGGCCTCTACAGACAATATTTAATCTTCTTCCGGATGAGGTTGTTGAACATAGTTACTCTTGTGCACTTGAGAGGTCATTTTTGTATCATGGTCGTATGTATGTCTCAGCATGGCGTATTTGCTTCCATTCTAATGTGTTCTCAAAGCAAATGAAGGTGGTAATTCCTTTTGAGGATATAGATGAGATTCGAAGGAGTCAGCATGCATTTATTAATCCTTCTATAACAATCATTCTTCGTATGGGTGCGGGTGGACATGGTGTACCTCCTTTGGGAAGTCCTGATGGTAGAGTAAGATACAAGTTTGCATCATTTTGGAATAGGAATCATACCTTTAGAAATTTACAACGTGCAGCAAAGATTTTCTGTGAAATGCTGGAAGCTGAGAAGAAGGAAAACGCTGAGTCAGAATTGCGTGCACATAGCAGCTCTGTTAGGGGAAATAAGATACCGGATAATGTTCCTGAAGAAAATTTGGGAAAAACTGGAAAGTCCCAACCTTTTGTCAAAGAAGAGGCTTTAGTTGGTATATATAATGATGTTTTCCCTTGCAAGGCTGAGCAGTTCTTTAACTTGTTATTTAACGATGATTCAAAATTTACGAGCGAGTATCGTTCAGTTCGAAAGGATACTAATCTGGTGATGGGACAGTGGCATACAGCAGATGAATATGATGGTCAAGTCAGAGAGATAACCTTCAGATCTCTTTGTAACAGTCCTATGTGCCCTCCAGACACTGCCATGACAGAGTGGCAACATGTTGTTCTATCGCCAGACAAGAAAAAATTGGTGTTTGAAACCGTCCAACAGGCACATGATGTACCATTTGGGTCCTATTTTGAGGTGCATTGTAAATGGAGTTTGGAGACAATTAATGAAAGTTCAAGTGCATTGGACATAAAAGTGGGTGCGCACTTTAAGAAATGGTGTGTGATGCAATCTAAAATCAAGGCAGGGGCAGTCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGAAGTTGTCCGATCTTATGTGGAGAACAGCCCTTCTGGCGGTGAGATTGACACGGCGGTTTCACCCCCTCCAACTTCTGACGGCGCGTAA 1821 0.4201 MCTAETLTTLQFLTSHFHFEIMNPYALDLALDFLVPSLWEIKVTVATSMFVIIAYWFFTYRTGDFDVDRVLVDNSGDASDDKDKMAQFKGDSQINSAYLIKLELWAAKNLIGANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWYTLDSPSGQVCLHIKTRKLSTNCSRMNGYGVPNPRRRMPTEKQGPTVVHQKPGPLQTIFNLLPDEVVEHSYSCALERSFLYHGRMYVSAWRICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPSITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHTFRNLQRAAKIFCEMLEAEKKENAESELRAHSSSVRGNKIPDNVPEENLGKTGKSQPFVKEEALVGIYNDVFPCKAEQFFNLLFNDDSKFTSEYRSVRKDTNLVMGQWHTADEYDGQVREITFRSLCNSPMCPPDTAMTEWQHVVLSPDKKKLVFETVQQAHDVPFGSYFEVHCKWSLETINESSSALDIKVGAHFKKWCVMQSKIKAGAVNEYKKEVDVMLEVVRSYVENSPSGGEIDTAVSPPPTSDGA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0018 606 PRINTS C2 domain signature 115 127 IPR000008 -
Lele32g0018 606 PRINTS C2 domain signature 139 152 IPR000008 -
Lele32g0018 606 PRINTS C2 domain signature 160 168 IPR000008 -
Lele32g0018 606 Gene3D C2 domain 82 213 IPR035892 -
Lele32g0018 606 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 98 210 IPR035892 -
Lele32g0018 606 MobiDBLite consensus disorder prediction 379 408 - -
Lele32g0018 606 Pfam GRAM domain 249 321 IPR004182 -
Lele32g0018 606 SMART C2_3c 99 195 IPR000008 -
Lele32g0018 606 Pfam C2 domain 102 196 IPR000008 -
Lele32g0018 606 Pfam VAD1 Analog of StAR-related lipid transfer domain 422 567 IPR031968 -
Lele32g0018 606 CDD C2 100 196 - -
Lele32g0018 606 Gene3D - 247 365 IPR011993 -
Lele32g0018 606 ProSiteProfiles VASt domain profile. 418 588 IPR031968 -
Lele32g0018 606 MobiDBLite consensus disorder prediction 223 242 - -
Lele32g0018 606 ProSiteProfiles C2 domain profile. 80 196 IPR000008 -
Lele32g0018 606 MobiDBLite consensus disorder prediction 586 606 - -
Lele32g0018 606 SMART gram2001c 246 312 IPR004182 -
Lele32g0018 606 FunFam BAG-associated GRAM protein 1 isoform X2 247 366 - -
Lele32g0018 606 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 28 596 IPR044655 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0018 Lele-ChrLele32 124273 135280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0018 99 184 C2H2 Transcription Factor Family AT4G21160 25.581 4.25e-06 47.4