Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1535 ATGCTTACCGTGACAGACTGGAGGTTCACGCCAGTCCCTCGGACATTGGGAAACAGGGGAGGCACGTTCGCACCTTTGTGCGCTGCTTATTCGATCTCAAGGAAAGCCATGGAAAACATTGCCGCGCAATTGAAGCAAGGCATATCTCGCCAATTCTCCACCGGTTCTCTGCGCCGGAATCTGAGCCGTCAGTTCTCGCGGCAGTCGTCCTTGGATCCCAGACGCAACAATCTTAGGTTCAGTTTCGGTCGCCAGTCATCACTCGATCCGATTCGCCGCAGTCCTAGTCATGATAGTGACCTGGCGGTGCCAGAGAACCTTGACTCCACGATGCAGCTGCTGTTCATGGCCTGCAGGGGGGACGTGAAGGGAGTGGAGGATTTGCTAAATGAGGGCATGGATGTCAATAGCATTGACTTGGATGGCCGCACCGCGTTGCATATCGCTGCCTGTGAAGGACATGTGGACGTTGTAAAGCTCTTGCTCAGCCGCAAGGCAAATATTGACGCTCGCGATCGTTGGGGCAGTACGGCTGCTGCTGACGCCAAATACTATGGAAATACAGAAGTTTACAATATATTGAAGACCCGTGGAGCCAAAGTGCTGAAAACCAGGAAGACTCCGATGTCTGTTGCAAATCCTCGTGAAGTTCCCGAATATGAACTTAATCCCTTAGAACTCCAGGTCCGGAAGAGTGATGGCATTTCAAAGGGGGCATATCAAGTAGCTAAATGGAATGGCACTAAGGTTTCAGTCAAGATCCTTGATAAGGACTGTTATTCAGATCCTGATAGCATAAATGCTTTCAAACATGAGCTCACGTTATTGGAGAAGGTACGGCATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAATATACCCATGATGATAGTTTCAGAGTATCATCCTAAGGGTGATCTAGCAAGCTATCTTCAAAAGAAAGGTCGTCTATCCCCATCAAAAGCTCTATGTTTTGCTCTTGATATTGCTAGGGGCATGAATTATCTCCATGAATGCAAACCAGATCCTATTATCCACTGTGATTTAAAGCCAAACGTGGGGCTAACATTGACCTTTCAAGTGAGTTTTAATGCATGCTTGTACATGGCACCAGAGATCTACAAAGATGATACATTTGATAGAAGTGTGGATGCATACTCCTTTGGTCTCATTGTATATGAGATGATAGAGGGTATACAGCCCTTACAACCGAAGTCTCCAGACGAGGCCTTGAAACTTATGTGCATAGAAGGAAAAAGGCCACCGTTCAAGATCAAAACAAAAAGTTATCCTCCAGATTTGAGAGAGTTGATTGAGGAATGTTGGGATCCTGAACCTCTTGTCAGACCAACATTTTCTCAAGTCATTTTGCGATTAGACAAAATTGTTGCAAACTGCTCAAAACAAGGGTGGTGGAAAGGTACTTTCAAGCTTCCTTGGAAATAA 1452 0.4628 MLTVTDWRFTPVPRTLGNRGGTFAPLCAAYSISRKAMENIAAQLKQGISRQFSTGSLRRNLSRQFSRQSSLDPRRNNLRFSFGRQSSLDPIRRSPSHDSDLAVPENLDSTMQLLFMACRGDVKGVEDLLNEGMDVNSIDLDGRTALHIAACEGHVDVVKLLLSRKANIDARDRWGSTAAADAKYYGNTEVYNILKTRGAKVLKTRKTPMSVANPREVPEYELNPLELQVRKSDGISKGAYQVAKWNGTKVSVKILDKDCYSDPDSINAFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVSEYHPKGDLASYLQKKGRLSPSKALCFALDIARGMNYLHECKPDPIIHCDLKPNVGLTLTFQVSFNACLYMAPEIYKDDTFDRSVDAYSFGLIVYEMIEGIQPLQPKSPDEALKLMCIEGKRPPFKIKTKSYPPDLRELIEECWDPEPLVRPTFSQVILRLDKIVANCSKQGWWKGTFKLPWK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1535 483 Pfam Ankyrin repeats (3 copies) 115 201 IPR002110 GO:0005515
Lele31g1535 483 Gene3D - 78 220 IPR036770 -
Lele31g1535 483 Pfam Protein tyrosine and serine/threonine kinase 369 460 IPR001245 GO:0004672|GO:0006468
Lele31g1535 483 Pfam Protein tyrosine and serine/threonine kinase 237 351 IPR001245 GO:0004672|GO:0006468
Lele31g1535 483 Gene3D Transferase(Phosphotransferase) domain 1 303 357 - -
Lele31g1535 483 Gene3D Phosphorylase Kinase; domain 1 224 302 - -
Lele31g1535 483 ProSiteProfiles Protein kinase domain profile. 225 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1535 483 FunFam serine/threonine-protein kinase STY46-like 222 305 - -
Lele31g1535 483 Gene3D Transferase(Phosphotransferase) domain 1 358 473 - -
Lele31g1535 483 ProSiteProfiles Ankyrin repeat region circular profile. 141 173 - -
Lele31g1535 483 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 149 464 - -
Lele31g1535 483 SUPERFAMILY Protein kinase-like (PK-like) 237 461 IPR011009 -
Lele31g1535 483 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
Lele31g1535 483 SUPERFAMILY Ankyrin repeat 111 205 IPR036770 -
Lele31g1535 483 SMART ANK_2a 109 137 IPR002110 GO:0005515
Lele31g1535 483 SMART ANK_2a 141 170 IPR002110 GO:0005515
Lele31g1535 483 SMART ANK_2a 174 203 IPR002110 GO:0005515
Lele31g1535 483 FunFam Integrin-linked protein kinase 1 83 220 - -
Lele31g1535 483 PIRSF ILK 44 359 - -
Lele31g1535 483 PIRSF ILK 358 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1535 Lele-ChrLele31 20513483 20523389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1535 37 483 MAP Kinase Kinase Kinase AT2G31800 74.686 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lele31g1535 PK_Tyr_Ser-Thr 8.8e-23 CL0016