Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1524 ATGACGGATTTGGCCCTGGATTTCCTGGTTCCGTCTTTGTGGGAGATCAAAGTCACAGTTGCCACCTCCATGTTTGTGATAATCGCCTATTGGTTTTTCACGTACAGAACTGGAGACTTTGATGTTGATAGGGTACTTGTTGACAATTCCGGGGATGCTTCTGACGACAAAGACAAGATGGCCCAGTTTAAAGGAGATTCTCAGACCAATTCGGCATATTTGATCAAGTTGGAACTGTTGGCTGCTAAGAATCTTATTGGTGCAAATTTAAATGGCATGTCAGATCCTTATGCTATCATCACATGTGGCAATGAGAAGAGATTCAGTTCCATGGTTCCTGGTTCAAGAAATCCTATGTGGGGTGAAGAATTCAATTTCTCTGTCGACGAACTTCCTGTCCAGATTAACGTTACGATATATGATTGGGATATTATTTGGAAAAGTGCTGTTCTAGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCAGTATGGTATACATTAGATAGTCCATCAGGGCAGGTTTGCCTTCACATAGAAACAAGAAAACTGTCCGCAAATTCTTCCAGGATGAATGGGTATGGCGTACCCAGCACTCGCAGAAGGATGCCCACAGAAAAGCAAGGGCCTACTGTTGTTCATCAAAAGCCAGGGCCTCTTCAGACAATATTTAATCTTCTTCCAGATGAGGTTGTTGAACATAGTTACTCTTGTGCACTTGAGAGGTCATTTTTGTATCATGGTCGTATGTATGTCTCAGCATGGCGTATTTGCTTCCATTCTAATGTGTTCTCAAAGCAAATGAAGGTGGTAATTCCTTTTGAGGATATAGATGAGATTCGAAGGAGTCAGCATGCATTTATTAATCCTTCTATAACAATTATTCTTCGTATGGGTGCGGGTGGACATGGTGTACCTCCTTTGGGAAGTCCTGATGGTAGAGTAAGATACAAGTTTGCATCATTTTGGAATAGGAATCATACATTTAGAAATTTACAACGTGCTGCAAAGATTTTCCGTGAAATGCTGGAAGCTGAGAAGAAGGAAAATGCAGAGTCAGAATTGCGTGCACATAGCAGCTCTGTTAGGGGAAATAAGATACCGGATAAGGCTCCTGAAGAAAATATGGGAAAAACTGCAAAGTTTCAACCTTTTGTCAAAGAAGAGGCTTTAGTTGGTATATATAATGATGTTTTCCCTTCCAAGGCTGAGCAGTTCTTTAACTTGTTATTTAACAATGATTCAAAATTTACGAGCGAGTATCGTTCAGTACGAAAAGATACTAATCTGGTGATGGGACAGTGGCATACAGCAGATGAATATGATGGTCAAGTCAGAGAGATAACCTTCAGATCTCTTTGTAACAGTCCTATGTGCCCTCCAGACACTGCCATGACAGAGTGGCAACATGTTGTTCTATCCCCAGACAAGAAAAAATTGGTGTTTGAAACCGTCCAACAGGCACATGATGTACCATTTGGGTCCTATTTTGAGGTGCATTGTAAATGGAGTTTGGAGACAATTAATGAAAGTTCAAGTACATTGGACATAAAAGTGGGTGCGCACTTTAAGAAATGGTGTGTGATGCAATCTAAAATCAAGGCAGGGGCAGTCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGAAGTTGCCCGATCTTATGTAGAGAACAGCGCTTCCCGTGGTGAGATTGACACGGCGGTTTCACCCCCGCCAACTTCTGACAGCTCGTAA 1746 0.4164 MTDLALDFLVPSLWEIKVTVATSMFVIIAYWFFTYRTGDFDVDRVLVDNSGDASDDKDKMAQFKGDSQTNSAYLIKLELLAAKNLIGANLNGMSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWYTLDSPSGQVCLHIETRKLSANSSRMNGYGVPSTRRRMPTEKQGPTVVHQKPGPLQTIFNLLPDEVVEHSYSCALERSFLYHGRMYVSAWRICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPSITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHTFRNLQRAAKIFREMLEAEKKENAESELRAHSSSVRGNKIPDKAPEENMGKTAKFQPFVKEEALVGIYNDVFPSKAEQFFNLLFNNDSKFTSEYRSVRKDTNLVMGQWHTADEYDGQVREITFRSLCNSPMCPPDTAMTEWQHVVLSPDKKKLVFETVQQAHDVPFGSYFEVHCKWSLETINESSSTLDIKVGAHFKKWCVMQSKIKAGAVNEYKKEVDVMLEVARSYVENSASRGEIDTAVSPPPTSDSS 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1524 581 FunFam BAG-associated GRAM protein 1 isoform X2 222 341 - -
Lele31g1524 581 Coils Coil 332 352 - -
Lele31g1524 581 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 2 573 IPR044655 -
Lele31g1524 581 ProSiteProfiles C2 domain profile. 55 171 IPR000008 -
Lele31g1524 581 ProSiteProfiles VASt domain profile. 393 563 IPR031968 -
Lele31g1524 581 CDD C2 75 171 - -
Lele31g1524 581 MobiDBLite consensus disorder prediction 353 378 - -
Lele31g1524 581 SMART gram2001c 221 287 IPR004182 -
Lele31g1524 581 Pfam VAD1 Analog of StAR-related lipid transfer domain 397 542 IPR031968 -
Lele31g1524 581 PRINTS C2 domain signature 114 127 IPR000008 -
Lele31g1524 581 PRINTS C2 domain signature 90 102 IPR000008 -
Lele31g1524 581 PRINTS C2 domain signature 135 143 IPR000008 -
Lele31g1524 581 Gene3D - 222 340 IPR011993 -
Lele31g1524 581 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 73 184 IPR035892 -
Lele31g1524 581 MobiDBLite consensus disorder prediction 191 217 - -
Lele31g1524 581 Pfam C2 domain 76 171 IPR000008 -
Lele31g1524 581 Pfam GRAM domain 224 296 IPR004182 -
Lele31g1524 581 SMART C2_3c 74 170 IPR000008 -
Lele31g1524 581 Gene3D C2 domain 57 188 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1524 Lele-ChrLele31 20413572 20423480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1524 94 159 C2H2 Transcription Factor Family AT4G21160 28.788 6.40e-06 46.6