Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1521 ATGATCGAACGACGCCGTTGGGATATGGATATGGATAAAGATGAAGCCCAAAAGGGTTCTTCCCCATTAGAGGAAGCTGGCGCAGTGACGTTATTGCGAGTCCAAATGGCAGAGGCGTCTATTTTCACAACCCGCGGTATAGTCCGTGTGGAAGGTTTAGAAGCATCAATTACAGATTCTAATGAAAATTCGGCGTTCTTAAAAAATGCCAAAATCGTTGTAGAATCTGAAGATGGAAATAAGTTACAACTAAGAGTGGACTTGGCTGGGGATCAAACACAAAGGGTATTTAACCAGGTCCTTACAAATTTAGCTCGCACTGCCCCACCGATTCCAGGATTTCGAAGACAAAAAGGAGGAAAAACATCCAAGGTTCCAACCAACTTTCTTCTGCAGATGCTTGGCGAAGAACGCGTTACAAAGTTTGTAATACAAGAAATACTCAATTCAACAATGGCTGATTATGTGAGAAAGGCAAGACTAGTTACAAAGGATATAATTCGAGCAAACTTGGCAAACAAAACGGAATCCTGTTTTACGCTGGGGAATAGCAACAATGAGCATGTTCTAGATGATAAGCTACCGTTGGGAATACTTCGTAGTCATAAGAGAAAGAGTGGAGATATGGTTCCGAAGCCAAATTGGGTCAAAAAGAAGAATGGAGCTTTGCTTGCTTGCTTGCTGATTTTGTATATTCAACTGACAGCCAAGGTTTCCATGACGGCCAGCTCCTTCTGCAATGCTGACTCTGTGTTCTCGGAGAGAAAGGAGAAGATCGGGGAACGAATTGTTGCCTTGCAGCAGCTCGTTTCTCCATTTGGGAAGTCAGATACAGCTTCGGTCCTTTTAGAGGCCACTCACTATATAAGGTTCCTTCAGAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAATGCTCTCCTACAAGCAAAACGCAGGATATAGAGGCGTACAGCCTGAGGAGTAGAGGATTATGTCTGGTTCCAGTGTCGTATACGATTGGAGTTGCCCAGAGCAATGGTGCAGATATATGGGCCCCGACCAAATCGTCACAATTTAACTAG 1065 0.4376 MIERRRWDMDMDKDEAQKGSSPLEEAGAVTLLRVQMAEASIFTTRGIVRVEGLEASITDSNENSAFLKNAKIVVESEDGNKLQLRVDLAGDQTQRVFNQVLTNLARTAPPIPGFRRQKGGKTSKVPTNFLLQMLGEERVTKFVIQEILNSTMADYVRKARLVTKDIIRANLANKTESCFTLGNSNNEHVLDDKLPLGILRSHKRKSGDMVPKPNWVKKKNGALLACLLILYIQLTAKVSMTASSFCNADSVFSERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLQKQVKVLSAPYLQCSPTSKTQDIEAYSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSSQFN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1521 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 243 292 IPR011598 GO:0046983
Lele31g1521 354 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 51 170 IPR005215 GO:0015031
Lele31g1521 354 FunFam Trigger factor 70 189 - -
Lele31g1521 354 SMART finulus 251 298 IPR011598 GO:0046983
Lele31g1521 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 255 307 IPR036638 GO:0046983
Lele31g1521 354 Gene3D - 72 182 IPR036611 GO:0006457|GO:0015031
Lele31g1521 354 SUPERFAMILY Trigger factor ribosome-binding domain 71 161 IPR036611 GO:0006457|GO:0015031
Lele31g1521 354 Pfam Bacterial trigger factor protein (TF) 71 161 IPR008881 GO:0006457|GO:0015031
Lele31g1521 354 CDD bHLH_AtbHLH_like 254 300 IPR045239 -
Lele31g1521 354 MobiDBLite consensus disorder prediction 1 22 - -
Lele31g1521 354 MobiDBLite consensus disorder prediction 1 20 - -
Lele31g1521 354 Gene3D - 253 311 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1521 Lele-ChrLele31 20397567 20405650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1521 247 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 66.981 1.53e-46 154