Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1517 ATGGCTTCCTGTCCATTACCCCTGCTTCTGTCAATCGCTCAATCTCTAAATCTGTGCGCCTTGGTAGGTTCTGCTTGCGGTAGAGCTCTGTCCTACGCTTCCCAAGTCATTCCTGATGACAAAGTTCGATGTCTGGCTGTGCATTGCTCAAGCTTCGATCTTCAAACCAAGTCCACGAGGGCAAGAGAATGTGTAGCTATGTTTAACAACATTACGCGTAGAGACATTCTCGGGTTTGCTTTCGGAGCCCCAACCCTCTTCATGAATTCGTTTCCTGCCAAAGGAGCTGGTTTGCCCCCAGAGGAAAAACCAAGGCTCTGTGATGATACCTGTGAGAAAGAGCTTGAAAATGTGCCTGTGATAACTACCGAGTCAGGTTTGCAATACAAGGATATTAAAGTTGGAAGAGGCTCTACACCACCAGTTGGATTTCAGGTGGCTGCTAACTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGTCAGCCTTACATTTTTCGCGTTGGCTCTGGTCAGGTGATAAAGGGACTTGATGAAGGAATTTTGGGCATGAAAATAGGAGGAAAACGCCGGCTATACATACCTGGATCTTTGGCATTCCCCAAAGGTCTTACATCTGCTCCAGGAAGACCAAGGGTGGCTCCGAACAGTCCAGTCATATTTGATGTTAGTCTGGAATACATCCCAGGGCTTGAACTGGACGAGGAATAA 729 0.465 MASCPLPLLLSIAQSLNLCALVGSACGRALSYASQVIPDDKVRCLAVHCSSFDLQTKSTRARECVAMFNNITRRDILGFAFGAPTLFMNSFPAKGAGLPPEEKPRLCDDTCEKELENVPVITTESGLQYKDIKVGRGSTPPVGFQVAANYVAMVPSGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILGMKIGGKRRLYIPGSLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLELDEE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1517 242 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 142 231 IPR001179 GO:0003755
Lele31g1517 242 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 143 235 IPR001179 GO:0003755
Lele31g1517 242 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 94 235 - -
Lele31g1517 242 Gene3D - 106 234 IPR046357 GO:0003755
Lele31g1517 242 SUPERFAMILY FKBP-like 108 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1517 Lele-ChrLele31 20380690 20383841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1517 124 231 Calmodulin-binding Proteins AT3G25230 39.450 1.74e-14 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0025 29 167795 170927 Lele31g1517 31 20380690 20383841 hybridization
Lele30g1369 30 15843826 15847853 Lele31g1517 31 20380690 20383841 hybridization