Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1466 ATGGGCTCAATGAACTCAAACAACTGGCTCTCCTTCCCTCTTTCTCCTACCCAGTCTTCCTTACCTCCACAGCTCCAAGCCACTCAATCCCATCAGTTTTCTCTTGGATTAGCTAATGATCCCATGGAGAACCCATTCCAAAACCACGATTGGAATCTGATGAATACGCACGGCAGCAACGTTAATGAGGTTCCGAAGGTTGCTGATTTTCTAGGAGTGGGAAAGTCTGAGAATCAGTCGGATCTTGCAGCCTTTAACGAAATTCAGTCAAATGATACGGGTTACCTATTCACAAACAGCAGTCTGGTGCCGATGCAAAGCTCAGTGGTGGCCACATCTGGCAACTTCGAGTATCAAGAAAACAATGCCAACTCGAACCTGCAGTCTTTGACATTATCCATGGGCAGTGGTAAGGATTCTACCTGTGAAACTAGTGGCGACAACAGTACTAATACTGCAGTTGAACCTGCACCTCGAAGAACTTTAGATACATTCGGTCAGAGAACATCAATCTATCGAGGTGTAACCAGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGACAATAGTTGTAGAAGAGAAGGACAATCACGAAAGGGACGCCAAGGTGGATATGACAAAGAAGAGAAAGCAGCTAGGGCCTACGATTTAGCGGCACTAAAGTACTGGGGAACATCCACAACTACCAACTTTCCAATCAGTAACTATGAGAAGGAACTGGAGGAGATGAAGCACATGACAAGACAAGAATTTGTGGCCGCCATACGAAGGAAGAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCATCATCAACATGGGAGATGGCAGGCAAGGATCGGTAGAGTCGCGGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATATGACATAGCGGCGATCAAGTTCAGAGGACTAAACGCAGTGACAAACTTCGACATGAGCCGTTACGACGTGAAAGCCATACTTGAGAGCAACACGCTTCCAATCGGAGGAGGAGCTGCTAAACGACTGAAGGAAGCTCAGGCTCTGGAATGTTCTAGAAAAAGAGAGGAAATGATAGCCCTCGGATCGAGCTTTCAGTACGGCAGCGGCAGCTGCGGAGGCGGCAGCTCTAGCAGGCTCCAACTACAAGCCTACCCACTGATGCAGTTAGATCAGGCGCAACCATTGTTAAGCCTACAGAACCAAGAGATATCTCAGTACTCGTCACTTCATCATCCCAGTTATATCCAAACCCAGCTTCAGTTGCACCATCAAACTGGTTCTTCTAACTATAACTTTCATCAATCGCCAAGCAATAACGCTCAGTTGTACAATAGCTATCTTCAGAGCCACCCGGCTCTGCTGCAGGGTTTGATGAACATGGGTTCTTGTTCTTCTTCTGTGATGGACAACGATGGAGGGTCTGGTGGGAGTTACAGTGGAGGAGGAGGAGGGTTTATGGGCATGGCTTCCAATACGACTTCGGCGGGATCAGCGGAGGAGCTGGCACTGGTGAAGGTCGAGAACTACAATATGCCGTCTGGTGGTTACGGCGGCGGCTGGCCGTCGGAGTCCATGCAGGGATCCAATGCTGCTCTCTTTACAATGTGGAATGACTGA 1650 0.483 MGSMNSNNWLSFPLSPTQSSLPPQLQATQSHQFSLGLANDPMENPFQNHDWNLMNTHGSNVNEVPKVADFLGVGKSENQSDLAAFNEIQSNDTGYLFTNSSLVPMQSSVVATSGNFEYQENNANSNLQSLTLSMGSGKDSTCETSGDNSTNTAVEPAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSSFQYGSGSCGGGSSSRLQLQAYPLMQLDQAQPLLSLQNQEISQYSSLHHPSYIQTQLQLHHQTGSSNYNFHQSPSNNAQLYNSYLQSHPALLQGLMNMGSCSSSVMDNDGGSGGSYSGGGGGFMGMASNTTSAGSAEELALVKVENYNMPSGGYGGGWPSESMQGSNAALFTMWND 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1466 549 Gene3D AP2/ERF domain 171 236 IPR036955 GO:0003700|GO:0006355
Lele31g1466 549 Gene3D AP2/ERF domain 270 330 IPR036955 GO:0003700|GO:0006355
Lele31g1466 549 ProSiteProfiles AP2/ERF domain profile. 171 234 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 SMART rav1_2 270 334 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 SMART rav1_2 171 240 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 MobiDBLite consensus disorder prediction 135 155 - -
Lele31g1466 549 SUPERFAMILY DNA-binding domain 170 236 IPR016177 GO:0003677
Lele31g1466 549 CDD AP2 170 236 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 PRINTS Ethylene responsive element binding protein signature 310 330 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 PRINTS Ethylene responsive element binding protein signature 172 183 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 ProSiteProfiles AP2/ERF domain profile. 270 328 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 70 415 - -
Lele31g1466 549 FunFam AP2-like ethylene-responsive transcription factor ANT 170 236 - -
Lele31g1466 549 Pfam AP2 domain 171 226 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 Pfam AP2 domain 271 320 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 FunFam AP2-like ethylene-responsive transcription factor 269 330 - -
Lele31g1466 549 CDD AP2 269 330 IPR001471 GO:0003700|GO:0006355
Lele31g1466 549 SUPERFAMILY DNA-binding domain 269 330 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1466 Lele-ChrLele31 20051071 20053761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1466 4 549 AP2-EREBP Transcription Factor Family AT3G20840 64.716 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele31g1466 AP2 2.5e-09 CL0081