Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1464 ATGGTGAACACATTTCTTGCTCGGACTCATCGATGCGACGCTGAGCCTATAGATAGGCCTCAAGGTTTAATTTCCCGCAATTTTCTTTTTCTTCCTGGCCAACAGTTTCTATTCGTTGTCTTCGCACTTCCCTTAATCACATCGTTTTCATTCTCCAATATATGTTCGGTTCAATGGATATTGGATTCTGTCGGCTCCTTGGGAAATACAAGGACTGGATGTCAAGCTCCTCCAGAGGGTCCTATATTGTGCATCAATAACTGTGGATTTTTTGGAAGTGCTGCCACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGTTGAAACAGGAGCAGGCCAAGCTTGCGGCATCGTCCATTGGGAATATTATGAATGGGTCATCAAGCAGCAGTGGAAATGAACCTGTTGTTTCTTCAAATGTGGATATCCCAGTCAATTCACTAGAGCCTAAAACTACATCCGAAGAACCTTTTTTGGCTTCAGGCTCAAAGGAGAGTGTTGAGGCAAAGCCGAAGGATGGACCCAAACGCTGCAGCAGCTGCTATAAGCGGGTTGGTTTGACAGGGTTCAATTGTCGGTGTGGTAACCTTTTCTGTGCTGCACACCGCTACTCAGACAAGCATGATTGCACCTTTGATTACCGCACTGCTGCAAGGGATGCCATAGCTAAAGCAAATCCAATTGTTAAGGCTGAAAAGCTTGATAAGATCTAG 717 0.4491 MVNTFLARTHRCDAEPIDRPQGLISRNFLFLPGQQFLFVVFALPLITSFSFSNICSVQWILDSVGSLGNTRTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLAASSIGNIMNGSSSSSGNEPVVSSNVDIPVNSLEPKTTSEEPFLASGSKESVEAKPKDGPKRCSSCYKRVGLTGFNCRCGNLFCAAHRYSDKHDCTFDYRTAARDAIAKANPIVKAEKLDKI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1464 238 Gene3D - 72 135 - -
Lele31g1464 238 MobiDBLite consensus disorder prediction 149 173 - -
Lele31g1464 238 Pfam A20-like zinc finger 82 105 IPR002653 GO:0003677|GO:0008270
Lele31g1464 238 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 83 119 - -
Lele31g1464 238 Gene3D - 154 234 IPR035896 -
Lele31g1464 238 ProSiteProfiles Zinc finger A20-type profile. 78 112 IPR002653 GO:0003677|GO:0008270
Lele31g1464 238 ProSiteProfiles Zinc finger AN1-type profile. 173 219 IPR000058 GO:0008270
Lele31g1464 238 PANTHER AN1-TYPE ZINC FINGER PROTEIN 79 238 - -
Lele31g1464 238 SMART AN1_Zf_4 179 216 IPR000058 GO:0008270
Lele31g1464 238 SMART A20_3 81 105 IPR002653 GO:0003677|GO:0008270
Lele31g1464 238 Pfam AN1-like Zinc finger 179 215 IPR000058 GO:0008270
Lele31g1464 238 SUPERFAMILY AN1-like Zinc finger 165 233 IPR035896 -
Lele31g1464 238 FunFam Zinc finger AN1-type containing 6 152 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1464 Lele-ChrLele31 20043885 20046510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1464 74 238 C2H2 Transcription Factor Family AT3G52800 42.775 6.17e-36 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0085 29 502914 505507 Lele31g1464 31 20043885 20046510 hybridization
Lele30g1311 30 15499018 15499536 Lele31g1464 31 20043885 20046510 hybridization