Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele31g1462 | ATGCTTGAACTTGACTGTAAGTTTCACGCTGCAGAGCAATTGTCTGAGAAAGAATTCAAAATGAGTTGGAACACAAACATGGAGGTCCACTACAACAATATCAGCTACCCCTACAATACAGCAGGAAGCTTTATTGAATATTTTGAAGGTCTAACCTACGAACACGTCAATTTCATTTTTTCTGGTGCTTCTCATGCTCAGGAGAGCTTGTACCCATCAACTACAAGTTTATACAAGTTTGGCCTATCTGAGCCTGAGAATACTTCATACTATCGTTACAGTGATGGTTATGAGGTGAATAATCATGACCCTCGGATGGATGAGCACAGAAGGCCTTTAGAGAACCCAGCAATATTTAGTGAACATACTGCAGCAGCAAGTACAGAATGGGGTGAAGGTGTAAACGCCACTGCACGAGACAATTCTGTTGAGTGCCCAAGAAGACATCATAATGCCCATGACTATCAGGTCGCTTGGCACGACAATATTGATCCTGACCACATGTCCTATGAGGAATTACTTGAGTTGGGTGAGGCTGTTGGAACTCAAAGCCGTGGTCTCTCCCAAGAACAGATCTCTTTGCTTCCAGTTTCAAAGTACAAGTGTGGGTTTTTTTTACGCAAAAAATCACGGGATGAGAGATGTGTGATTTGCCAGATGGAATATAGGAGAGGGGAAAAACGGATCACCTTACCTTGCAAACATGTCTATCATGCTGGTTGTGCGACAACATGGCTTAGCATCAACAAGGCTTGCCCTATATGTTACATGGAGGTGTTTGCTGATATGTCAAAACGCAAATGA | 804 | 0.4279 | MLELDCKFHAAEQLSEKEFKMSWNTNMEVHYNNISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESLYPSTTSLYKFGLSEPENTSYYRYSDGYEVNNHDPRMDEHRRPLENPAIFSEHTAAASTEWGEGVNATARDNSVECPRRHHNAHDYQVAWHDNIDPDHMSYEELLELGEAVGTQSRGLSQEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYRRGEKRITLPCKHVYHAGCATTWLSINKACPICYMEVFADMSKRK | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele31g1462 | 267 | ProSiteProfiles | Zinc finger RING-type profile. | 215 | 255 | IPR001841 | - | |
Lele31g1462 | 267 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 25 | 260 | IPR033276 | GO:0004842|GO:0016567|GO:0046621 | |
Lele31g1462 | 267 | SUPERFAMILY | RING/U-box | 211 | 262 | - | - | |
Lele31g1462 | 267 | SMART | ring_2 | 215 | 255 | IPR001841 | - | |
Lele31g1462 | 267 | Pfam | Ring finger domain | 214 | 255 | IPR001841 | - | |
Lele31g1462 | 267 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 177 | 260 | IPR013083 | - | |
Lele31g1462 | 267 | FunFam | E3 ubiquitin ligase BIG BROTHER | 177 | 260 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele31g1462 | Lele-ChrLele31 | 20029486 | 20033663 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele31g1462 | 28 | 264 | C3H Transcription Factor Family | AT3G63530 | 43.621 | 8.58e-67 | 206 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele29g0087 | 29 | 512678 | 519606 | Lele31g1462 | 31 | 20029486 | 20033663 | hybridization | |
Lele30g1309 | 30 | 15476274 | 15480224 | Lele31g1462 | 31 | 20029486 | 20033663 | hybridization |