Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1456 ATGAGGAAGCCTGAGTCTGGGAAAGACAACAACAACAACAATAACAAGCTTAGGAAGGGTCTGTGGTCACCGGAAGAAGATGACAAGCTCATGAACTACATGCTAAAGAATGGACAAGGTTGTTGGAGTGATGTCGCCAGGAATGCCGGCTTGCAAAGATGTGGCAAAAGTTGTCGCCTTCGCTGGATCAATTACTTGAGGCCCGATCTTAAGCGTGGTGCTTTCTCTCCCCAGGAAGAAGAACTTATCATCCATCTTCACTCCCTTCTCGGCAACAGATGGTCCCAAATAGCGGCACGCTTGCCCGGGCGAACCGACAACGAAATCAAGAATTTCTGGAACTCCACAATAAAGAAAAGGCTCAAGCTCATGTCATCCACCACCACCCACACCACCTCACAAAATGCAAGCGACTCGTCTTCCTTATTGTCTGAGCCTAATATTAAAGACCTCAACAACGTCATGGGAGGTTTCATGCCTATGTTCAACAACAACATAATTGAGAGATTGCCCATGCTTGAGCATGGACTACACGCGCAAGCAGCTTCTGACGGATTCTTCAACGCTAATAATGGAGGACCTTGCTTCACACAAAATGGGGTTGACCACAACAACATCATTAATAATGGTTTTCATGTAGAAAATGGAGTGTTTGGGATTGGGAGTGTAAATATTGGAGCACAAGTAGGGGAGCTGTTTGTGCCTCCTCTAGAGAGTGTTAACACCATAACTGATAACCTGCAGAAACTGGATAATAGAGACACTAACGTTAACAGTTACTTTGACAACATACACAGCATCGTTAATAACTGCAGCAACAATAATAATAAAGGTGGGGTCGTGGAGAATCTGTTTCAGGAAGAGCTAACTTTGGGAGAGTGGGACTTAGAGGACTTGATGAAAGATGTTTCATCCTTTCCCTTTCTTGATTTTCCAAGCGGATGA 945 0.4466 MRKPESGKDNNNNNNKLRKGLWSPEEDDKLMNYMLKNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKLMSSTTTHTTSQNASDSSSLLSEPNIKDLNNVMGGFMPMFNNNIIERLPMLEHGLHAQAASDGFFNANNGGPCFTQNGVDHNNIINNGFHVENGVFGIGSVNIGAQVGELFVPPLESVNTITDNLQKLDNRDTNVNSYFDNIHSIVNNCSNNNNKGGVVENLFQEELTLGEWDLEDLMKDVSSFPFLDFPSG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1456 314 FunFam MYB transcription factor 16 72 - -
Lele31g1456 314 PANTHER MYB DOMAIN PROTEIN 55 11 153 - -
Lele31g1456 314 CDD SANT 22 66 IPR001005 -
Lele31g1456 314 CDD SANT 74 114 IPR001005 -
Lele31g1456 314 Gene3D - 73 142 - -
Lele31g1456 314 FunFam Transcription factor MYB46 73 147 - -
Lele31g1456 314 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Lele31g1456 314 Gene3D - 16 72 - -
Lele31g1456 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Lele31g1456 314 MobiDBLite consensus disorder prediction 1 21 - -
Lele31g1456 314 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Lele31g1456 314 SMART sant 18 68 IPR001005 -
Lele31g1456 314 SMART sant 71 119 IPR001005 -
Lele31g1456 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Lele31g1456 314 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Lele31g1456 314 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Lele31g1456 314 MobiDBLite consensus disorder prediction 124 144 - -
Lele31g1456 314 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1456 Lele-ChrLele31 20002494 20004388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1456 1 308 MYB Transcription Factor Family AT5G12870 49.521 8.10e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele31g1456 Myb_DNA-binding 1.1e-12 CL0123