Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1455 ATGGCCTCCGTAGCCCTCACCACCACCACCTCCTCCTTCCCCACTCTTCCATCCCTCCGATCGCGATCCTCTAACCGCATTCCTTCCAAACCCTCGCGCTTATGCTATTCGGCCTCTGGTTCCCTGCACTCTTCCAATTTCAAAGTACTCAAACAGAACTCTTTTCCATCTATTCCACCTCTGAGACTCTCTAAGTCTGGTTTCAATGTCAAACCACATTGGAAATACCCTTCTGTTAGAGCCTCCGCTTCGGGCGCTTCTCTCGCTTCGGCTCCAGCTCCGGCTCCGGCGCCTCAGCCATGGCGCGGCGCAGCCATCAAGCCTTTATTTGCCTCCATAGCTACTGGGGTTCTTCTCTGGTTCGCTCCCGTGCCTGCTGGAGTCTCAAAAAACGCGTGGCAACTGTTGGCTATATTCTTGGGCACCATCGTTGGCATTATTTCTCAGCCATTGCCCCTGGGAGCTGTGGCTATACTGGGTTTGGGCGTTTCTGTGCTGACCAAAACCCTGACGTTTGCAGCGGCATTTTCAGGGTTTGGCGATCCCATCCCGTGGCTCATTTGCTTGGCCTTCTTCTTTGCCAGAGGATTCATTAAGACTGGTCTTGGCAACCGGATTGCTTATCAATTTGTATCTCTTTTTGGTAGCTCGTCCTTAGGGCTGGGATATAGTTTAGTTTTTAGCGAGGCCTTGCTGGCACCGGCGATTCCTTCGGTTTCGGCTAGAGCAGGTGGAATATTTCTCCCGTTGGTGAAGTCCCTATGTGTAGCTTGTGGTAGTAACGTGGGCGATGGAACTGAGCATAAACTTGGGTCTTGGTTAATGCTGACCTGCTTTCAAACTTCGGTGATTTCATCAGCAATGTTTTTGACAGCAATGGCAGCGAATCCCCTGTGCGCCACTCTGACTGCCAATTCTATTAACCAGACAATTGGGTGGTTGGACTGGGCGAAAGCCGCGATTGTCCCCGGTTTGGTGTCATTGGTATTGGTACCATTGATTTTGTATGTGATTTACCCACCAACAGTAAAGGCCAGCCCAGATGCGCCCAAGCTTGCTCGGGAGAAGTTGCAGCAGATGGGACCAATGACAACTGAAGAGAAGACAATGGCTATCACTCTCTTTCTTACGGTGGGGCTTTGGATTTTTGGAGGGGCTCTGAAAGTAGATGCTGTATCTGCTGCCATTCTTGGATTATCTGTACTTCTTGTTACAGGGGTTGTTACATGGAAAGAGTGCTTGGCCGAGGGTGTTGCTTGGGATACCCTCACGTGGTTTGCTGCCCTCATAGCAATGGCTGGGTATCTGAACAAATATGGTCTTATTTCCTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGCGGATTGGGTCTCTCTTGGCAGCTATCATTTGGCATTCTGGTTCTTTTGTACTTCTACTCACATTACTTCTTTGCAAGTGGAGCAGCCCATATCGGTGCCATGTTTACAGCCTTCTTGTCAGTTGCTTCTGCTCTGGGCACTCCACCATACCTTGGAGCCATGGTGCTGTCTTTCCTATCCAACATCATGGGTGGCCTCACCCACTACGGGATCGGGTCAGCACCTGTGTTTTTTGGAGCCAATTATGTTCCTCTTGCCAAATGGTGGGGTTATGGTTTCCTTATTAGTATTGTAAACATCATTATCTGGCTTGGAGTTGGAGGAGTTTGGTGGAAGGCCATTGGAGAATTTCCCGTGAGCTTCCTTAGAAAGCGAGATAGGAATTCTTTGTTTCCCTTTCATTTGCTAACGGGGATACAATAA 1785 0.4941 MASVALTTTTSSFPTLPSLRSRSSNRIPSKPSRLCYSASGSLHSSNFKVLKQNSFPSIPPLRLSKSGFNVKPHWKYPSVRASASGASLASAPAPAPAPQPWRGAAIKPLFASIATGVLLWFAPVPAGVSKNAWQLLAIFLGTIVGIISQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLICLAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEHKLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTANSINQTIGWLDWAKAAIVPGLVSLVLVPLILYVIYPPTVKASPDAPKLAREKLQQMGPMTTEEKTMAITLFLTVGLWIFGGALKVDAVSAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYLGAMVLSFLSNIMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGVGGVWWKAIGEFPVSFLRKRDRNSLFPFHLLTGIQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1455 594 CDD ArsB_NhaD_permease 143 565 - -
Lele31g1455 594 Pfam Sodium:sulfate symporter transmembrane region 108 569 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lele31g1455 594 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 123 565 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lele31g1455 594 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 81 569 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1455 Lele-ChrLele31 19990258 19998264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1455 1 569 Antiporters AT5G12860 77.526 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0093 29 547433 554367 Lele31g1455 31 19990258 19998264 hybridization
Lele30g1303 30 15438486 15450827 Lele31g1455 31 19990258 19998264 hybridization