Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1446 ATGACCAGTTTGTTGAAGCAGATGGAACATGAAAAAACTCCCGTCCTAGAAGCAAGTTCCTCTCAGGAAATAGAGATGCCAGTTGCCTGCGAAATAATTGATATTCTTCCCGCGGCAACGGAGTCATGTTGCAGTTCTGTTTGCCCTTTTTCCAGACAAGAACATAGTTTTATGGCATCAGAAGAGTCATCAAAGTCGGCAAAGAAACTCTGTGGACTCATAGTTTTCTATGCAATGGTTATGCTTGTGGAAGTTGTTGGTGGTTTGAAAGCCAACAGCCTAGCTGTTATCAGCGATGCTGCGCATTTGCTTTCAGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCATCACGTTGGGAGGCAACTCCACATCAGTCTTTTGGATACAATAGGCTCGAGGTCCTGGGTGCTCTTCTTTCTGTGCAATTAATTTGGCTAATATCTGGCTTTTTAATATATGAAGCACTTGGGAGACTTCTTTACAGAAAGCCCCGTGTGAATGGAATGCTCATGCTTTCAATTGCAGCATTTGGGTTTGTTCTTAACTTAATTATGGTTTTATGGCTTGGTCACGATCACAGTCACCATCACCATCACCATCACCATCATCATGTCTGTGGAGGCTCTAATTATGATCATGGAAAGGAGGAGCAGCAGCATAATAACATAACAGATGAAGAGGAGCTTAGTCTAGTTTCAACTAGTCCTAGAAAAAGAAATGTACTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATTCAAACCGTGGGGGTGATGATTGCTGGAGCTGTAATATGGGCTAAACCAGATTGGTTAGTGGTTGACCTGTTGTGTACTCTAATATTCTGTGTTATATCTCTGGGAACTACAGTGTCAATGCTCAATAATATTTACGGCATTCTGATGGAGAGGACACCGAGTGAGATCGATATCGTGAAGCTGGAAAGTGATCTCAAGGGGATCAAGGGAGTGCAAGATATCCACGACTTGCACGTTTGGGCCATAACTGTTGGAAAAAATGTTCTTTCTTGTCATGTAGTAGCCGAGCCTGGGATAAGTTCCCCTGATTTGCTTAACAGGATTAGGCATTACTGTGAAAAAGCACACAAAATTCATCATGTAACTATACAAATTGAGTAA 1164 0.4227 MTSLLKQMEHEKTPVLEASSSQEIEMPVACEIIDILPAATESCCSSVCPFSRQEHSFMASEESSKSAKKLCGLIVFYAMVMLVEVVGGLKANSLAVISDAAHLLSDIAGFSISLFAVWASRWEATPHQSFGYNRLEVLGALLSVQLIWLISGFLIYEALGRLLYRKPRVNGMLMLSIAAFGFVLNLIMVLWLGHDHSHHHHHHHHHHVCGGSNYDHGKEEQQHNNITDEEELSLVSTSPRKRNVLNINLQGAYLHVMADLIQTVGVMIAGAVIWAKPDWLVVDLLCTLIFCVISLGTTVSMLNNIYGILMERTPSEIDIVKLESDLKGIKGVQDIHDLHVWAITVGKNVLSCHVVAEPGISSPDLLNRIRHYCEKAHKIHHVTIQIE 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1446 387 Pfam Cation efflux family 74 309 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele31g1446 387 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 314 387 IPR036837 -
Lele31g1446 387 MobiDBLite consensus disorder prediction 210 227 - -
Lele31g1446 387 Gene3D Cation efflux protein transmembrane domain 66 309 IPR027469 -
Lele31g1446 387 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 311 IPR027469 -
Lele31g1446 387 MobiDBLite consensus disorder prediction 203 232 - -
Lele31g1446 387 TIGRFAM CDF: cation diffusion facilitator family transporter 68 387 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele31g1446 387 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 41 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1446 Lele-ChrLele31 19932894 19934057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1446 8 387 Inorganic Solute Cotransporters AT2G29410 50.131 6.38e-121 353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0104 29 626906 628060 Lele31g1446 31 19932894 19934057 hybridization
Lele30g1291 30 15372339 15373499 Lele31g1446 31 19932894 19934057 hybridization