Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele31g1441 | ATGGTGACTTGTTGCCAGTTGACCATCTCTCTTGGCATCATCATCTCAAAAATGGAGTCTGAAGATAAGACAACATCATCAGAAACAAAGGCAAGCGATGAGCAAGGAGCGAGTCAAGTGACGAGGTCGTACGAGTGCAGCTTCTGTAAAAGGGGATTCTCTAATGCACAAGCATTGGGAGGCCACATGAACATTCACAGGAAAGACAAAGCCAAGATCAAGCAATCTTCTTCTAATTCAACCCATCGTCATCGTCATCTTCATCAGCCATCTTTGGATGTTCACAGTAAGGTCGAAGACAGAACCAGCTCAGCTTACTGGCCTAGCAGCAGGAATATGGAAGATTCGTCTTCCAGAGACGAAACCTGCGAAGAACTTGGCATAAGGCAGCTTCCTTTATTTGCAGAAACACCAAGTGGAGAAGAATTAGGTCGTGTTCATGATAGAAGAGGAATTGCTGAAGAAATGAAGGGTTCGCCTTCGGATTTAGACCTTGAACTCAGACTAGGGCCCGACCCACCCTCTCCCACTATTGGTACCCGAAAATTCTTTTGA | 555 | 0.4559 | MVTCCQLTISLGIIISKMESEDKTTSSETKASDEQGASQVTRSYECSFCKRGFSNAQALGGHMNIHRKDKAKIKQSSSNSTHRHRHLHQPSLDVHSKVEDRTSSAYWPSSRNMEDSSSRDETCEELGIRQLPLFAETPSGEELGRVHDRRGIAEEMKGSPSDLDLELRLGPDPPSPTIGTRKFF | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele31g1441 | 184 | Pfam | C2H2-type zinc finger | 44 | 68 | - | - | |
Lele31g1441 | 184 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 44 | 71 | IPR013087 | - | |
Lele31g1441 | 184 | SUPERFAMILY | beta-beta-alpha zinc fingers | 42 | 71 | IPR036236 | - | |
Lele31g1441 | 184 | MobiDBLite | consensus disorder prediction | 61 | 99 | - | - | |
Lele31g1441 | 184 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 46 | 66 | IPR013087 | - | |
Lele31g1441 | 184 | PANTHER | OS07G0101800 PROTEIN | 19 | 173 | - | - | |
Lele31g1441 | 184 | SMART | c2h2final6 | 44 | 66 | IPR013087 | - | |
Lele31g1441 | 184 | Gene3D | Classic Zinc Finger | 17 | 105 | - | - | |
Lele31g1441 | 184 | MobiDBLite | consensus disorder prediction | 155 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele31g1441 | Lele-ChrLele31 | 19908698 | 19909537 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele31g1441 | 41 | 180 | C2H2 Transcription Factor Family | AT3G53820 | 36.842 | 3.15e-17 | 72.8 |