Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1423 ATGGATCTTCACTTTGATGGAAGTCAATGTTTTATAAACGGTTATAAACTTGATGATGGCGCCGCCAGCTCCGATTCAAACTATTTCCCATATCCAGCGAACGATCGGGAACTCGACCAAAGCTATCGGAAACTTCTTAACTTCACAACCGATCCATTGTATCAATCTTGTGGGACTCCAGTGAGTTTTGCTAGCGTGACATATGAAGCATCAGAGCGGTTAGTTTCATCCTCGACTATAGACCCTGTAGCAGGTGTGTCAGATGTGGCGGCTGCCCCTACGACTTCGCCGCCACATCCTTCGCTGGAAGACGCTGACTTCTCAGAAACCATGAGGTACATAAGCCAGATACTCATGGAAGAGAACTTTGAACAGAAGCCAAGCATGTTTTATGATCCTTTGAGTCTACAAGTCACGGAGAAATCATTCTATGACGCTCTCAAAAAGGATCATCCTCTTTCCCCCAATCAGCATCCCCTAGACGTTCGTCAGAATCTTGATAGAACAGATGACAACTGTTGTGGTAGTAGTAACAGAAGCAGCACCAACAAGTCTCAGGATGCTAATAAGCTCTCTTCCTCCGATGCTCCATTTTCTGGTGATTATGCGTCCCAGTTAAATTTTCAATCCATCTCTCAGAAAGCTTCTCAACCTCCGAGTGCTTATACTTATATCAGCGACGGATTGTCAGATGTGGATCCCTCTTTTACTAGGATCATGGCTCAAAATATCTTTACTGATGCAGAATCTGTTTCACAATTTAAAAGGGGGTTGGAAGAAGCGAGCAAGTTTCTCCCTAAAGGACTTCAACTTGTCACTGGTCTGGAGAGCAACAACGTGCTTCCAGAGTCAACGGGGGCGCCTAAAAAGGCATTAGGGAATATTCGGGAGAATTCATATGGATTAAAGGGTAGGAAGAATCATGAACGTGAAGTTAGTGACACAGAAGGGAGAAGTAATAAGCATTCGGCAGTGTATGTGGAGGAGATTGATATATCTGAAATGTTTGATAAGGTGTTGCTTAGTGTCGAGAATGTTCCATTATGTGAGGAACACCACAAATGGATGCAGAATGGAACAGACAAGGTCAAAGAGCCAAGTGAACAGCCAAATTCATCTAATGGGGTGAAGACCCGCGGTAGGAGACAAGCCAGGAAGAAGGAAACCGTGGATTTGAGGACTCTTGTGACTTTGTGCGCGCAAGCCGTGTCTGCAAATGACTGCAGAACTGCCAATGAACTGCTAAAGCAGATTAGGCAGCATTCTTCCAAACTTGGTGATGCGTCACAGAGGCTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGCTGTGGTACTGGAACCCATATATTCTATGCCTCCCTAAGCTCCAAGAGGATATCTGCTGCTAATATGTTGAGAGCTTACTCAGTTCTAATATCTGTCTGCCCCTTCAGGAAGTTTGCATATTTTTTTGCAAATAAGATGATTATGGAAGCGGCTGAAAAGGCGGAAACTCTTCATATTATCGACTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTCCTTTCGCAAAGGGCGGGTGGGCCTCCGAAGCTACGCATCACAGGGATAGAATTGCCCCAAGCTGGGTTTCGTCCCGCAGAATTAATCGAGGAGACCGGTCGACGTCTATCTAATTATTGCAAACGTTTTAATGTTCCGTTTGAATACACGGCCATAGCATCACAAAACTGGGAAACCATCCCGTTAAAGGATTTTAAGATTGAGAGGAACGAACTGCTCGCCGTGAACTGTCTGTTGAGGCTTAAAAATTTGCTGGACGAGACGATTGAAGTAAAAAGTCCTAGAGATGCAGTTTTGAATTTGATCAGAAAGATGAATCCCGATATTTTTGTTCAATCCGTTGTCAATGGACCCTACAATGCCCCTTTCTTTGCCTCACGGTTCAAAGAGGCAATGTTCCATTATTCTGCGATGTATGATATGTTCGACACGGTCATACCCCGTGAAAATGAGTGGAGGTTGATGCTTGAGAGAGAGTTTATGGGTCGGGAGATCATGAACGTGGTAGCGTGCGAAGGGATCGAGAGGGTTGAGAGGCCCGAGACATACAAACACTGGCAAGTTAGGAATACGAGGGCCGGTTTCAGGCAGGCGCCACTGCCAGATGAGATAATGGTCAAATTCAACGAAAAGTTGAAGGCGTGGTATCACAGGGATTTTGTTATTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGACGCATCATTTATGCTTCCACATGCTGGGTGCCATCGTAA 2310 0.4519 MDLHFDGSQCFINGYKLDDGAASSDSNYFPYPANDRELDQSYRKLLNFTTDPLYQSCGTPVSFASVTYEASERLVSSSTIDPVAGVSDVAAAPTTSPPHPSLEDADFSETMRYISQILMEENFEQKPSMFYDPLSLQVTEKSFYDALKKDHPLSPNQHPLDVRQNLDRTDDNCCGSSNRSSTNKSQDANKLSSSDAPFSGDYASQLNFQSISQKASQPPSAYTYISDGLSDVDPSFTRIMAQNIFTDAESVSQFKRGLEEASKFLPKGLQLVTGLESNNVLPESTGAPKKALGNIRENSYGLKGRKNHEREVSDTEGRSNKHSAVYVEEIDISEMFDKVLLSVENVPLCEEHHKWMQNGTDKVKEPSEQPNSSNGVKTRGRRQARKKETVDLRTLVTLCAQAVSANDCRTANELLKQIRQHSSKLGDASQRLAHYFANGLEARLSGCGTGTHIFYASLSSKRISAANMLRAYSVLISVCPFRKFAYFFANKMIMEAAEKAETLHIIDFGIQYGFQWPILIKFLSQRAGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKIERNELLAVNCLLRLKNLLDETIEVKSPRDAVLNLIRKMNPDIFVQSVVNGPYNAPFFASRFKEAMFHYSAMYDMFDTVIPRENEWRLMLEREFMGREIMNVVACEGIERVERPETYKHWQVRNTRAGFRQAPLPDEIMVKFNEKLKAWYHRDFVIDEDNNWMLQGWKGRIIYASTCWVPS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1423 769 Pfam GRAS domain family 393 766 IPR005202 -
Lele31g1423 769 ProSiteProfiles GRAS family profile. 383 767 IPR005202 -
Lele31g1423 769 MobiDBLite consensus disorder prediction 359 387 - -
Lele31g1423 769 MobiDBLite consensus disorder prediction 149 196 - -
Lele31g1423 769 MobiDBLite consensus disorder prediction 301 320 - -
Lele31g1423 769 MobiDBLite consensus disorder prediction 169 196 - -
Lele31g1423 769 MobiDBLite consensus disorder prediction 282 320 - -
Lele31g1423 769 MobiDBLite consensus disorder prediction 362 378 - -
Lele31g1423 769 Coils Coil 411 431 - -
Lele31g1423 769 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 331 760 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1423 Lele-ChrLele31 19831619 19833928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1423 110 769 GRAS Transcription Factor Family AT1G07530 49.785 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele31g1423 GRAS 6e-113 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0129 29 722532 724565 Lele31g1423 31 19831619 19833928 hybridization
Lele30g1273 30 15276938 15279274 Lele31g1423 31 19831619 19833928 hybridization