Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1416 ATGGACAAGAGCATGTTAGGAGATCTGGACTCCCTTCCAGAGGAAGATAAGCTCAGAATGGCCACCATGATCGATCAGCTCCAAATTCGAGACAGGTTCCTCCACCCTCGTACAATCGTTTTCTGTGCTTGTAAGTGTGTTCCCAGGTCTTGGTTTATTTCTGTCATGGGAAGTTGTTTGGGCACCCAGATTAAAGCTGAGAGCCAGTGTAACACAGGGTTGGATTCAAAACACGTGAACACAGATGGGAGTGACCTGAGCGGCACGGGTAGCGAGGTCTCAAAGGCCTCGGCAACTCGTTCTCGCCGGAGTGAGGGTGAGATCTTGCAGTTATCCAATTTGAGGGGTTTTACTTATGCAGAATTGAAGGCGGCCACACGAAATTTCGGACCAGATAGAGTTTTAGGAGAAGGTGGTTTTGGGTCAGTCTTCAAAGGGTGGATTGATGAGAGGTCCCTAACTGCTACCAAGCCTGGCACTGGCATTATTGTTGCTGTGAAAAGGCTTAAGAAAGATAGCATGCAAGGTCACAATGAGTGGTTGGCTGAAGTGAATTTTCTAGGACAATTTTCTCATCCCCATCTCGTAAAGTTGATCGGGTATTGCCTTGAAGACGAACACCGCCTTCTGGTGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTATTCAGGAGGGGCTCTTATTTCCAACCTCTCTCATGGAGCCTCCGTCTGAAGATCGCCCTTGGTGCCGCCAGAGGGCTCGCATTTCTTCACTGTGCCGAAACAAAAGTGATATACAGAGACTTCAAGACCTCAAATATCTTGCTCGATTCAGATTACAATCCAAAACTTTCTGATTTTGGGTTGGCGAAGGATGGACCAGCAGAGGACAAAAGTCATGTGTCCACCAGAGTACTAGGAACCTATGGATATGCAGCGCCAGAATATGTAGCCACCGGTCACCTGACTGCAAAGAGTGATGTTTATAGTTTCGGAGTAGTACTTTTGGAAATGTTATCAGGTAGGCGAGCAATGGACAAGAATCGACCATCAGGACAACGCAACTTGGTGGAGTGGGCTAAGCCATACCTGGCAAACCAACGTAAGCTGTTTCGTGTGCTGGATACGCGTTTTGAAGGTCAATATACAATAGAAGAGGCCTACAAGACAGCTACGCTGGCATTGCGATGCATTTCTATTGAATCCAAGCTGAGGCCAAGCATGAAGGAGGTTGTTTCTGCATTGGAGCAGCTTCATGTTCCCAATGTGAATGGAGGCAAACAGAAGCCCTCTGTGGATGGTTCCAGTCGCAGAAAAAGTGAAGGTGACGCCAAGTATGGGAGGACCACCATAGCTTATCCCCCTCCATCTGCTTCCCCTCTCTATGCTTGA 1380 0.4783 MDKSMLGDLDSLPEEDKLRMATMIDQLQIRDRFLHPRTIVFCACKCVPRSWFISVMGSCLGTQIKAESQCNTGLDSKHVNTDGSDLSGTGSEVSKASATRSRRSEGEILQLSNLRGFTYAELKAATRNFGPDRVLGEGGFGSVFKGWIDERSLTATKPGTGIIVAVKRLKKDSMQGHNEWLAEVNFLGQFSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKIALGAARGLAFLHCAETKVIYRDFKTSNILLDSDYNPKLSDFGLAKDGPAEDKSHVSTRVLGTYGYAAPEYVATGHLTAKSDVYSFGVVLLEMLSGRRAMDKNRPSGQRNLVEWAKPYLANQRKLFRVLDTRFEGQYTIEEAYKTATLALRCISIESKLRPSMKEVVSALEQLHVPNVNGGKQKPSVDGSSRRKSEGDAKYGRTTIAYPPPSASPLYA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1416 459 MobiDBLite consensus disorder prediction 418 459 - -
Lele31g1416 459 SUPERFAMILY Protein kinase-like (PK-like) 105 411 IPR011009 -
Lele31g1416 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lele31g1416 459 Pfam Protein tyrosine and serine/threonine kinase 133 411 IPR001245 GO:0004672|GO:0006468
Lele31g1416 459 MobiDBLite consensus disorder prediction 80 101 - -
Lele31g1416 459 CDD STKc_IRAK 135 414 - -
Lele31g1416 459 ProSiteProfiles Protein kinase domain profile. 129 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1416 459 FunFam Probable serine/threonine-protein kinase PBL8 215 429 - -
Lele31g1416 459 Gene3D Phosphorylase Kinase; domain 1 99 214 - -
Lele31g1416 459 PANTHER OS01G0588500 PROTEIN-RELATED 94 415 - -
Lele31g1416 459 ProSitePatterns Protein kinases ATP-binding region signature. 135 167 IPR017441 GO:0005524
Lele31g1416 459 FunFam Serine/threonine-protein kinase BIK1 96 214 - -
Lele31g1416 459 Gene3D Transferase(Phosphotransferase) domain 1 215 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1416 Lele-ChrLele31 19802203 19807085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1416 83 411 Glycoside Hydrolase AT3G07070 46.687 1.20e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele31g1416 Pkinase 1.6e-45 CL0016