Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1414 ATGAGTACTTACCCAATGGGAGTCTTCAAGACCTCCTATTCCGGGAAAACAGCAATTCCCCTGACATGGAATAGCCGAGCACGTATGATTGCTGACATTGCTAGCGCTCTTTGCTTTTTACACACTTCCAAACCCAAAACTATTGTCCATGGTGACCTAAAGCCTGAAACGATACTTCTTGACTCAGCACTTACTTGCAAGATATGTGAATTTGGGTTCTGCAGACTGTTGACAGAGGAGTCATTCTATCGTCCTAGTTTCAGATTCAGCGCTGAGCTAAAAAGTACTTCTCCATATACAGATCCAGAGTCTGAGAGGACTGGACTACTAACACGGAAGTCTGATATCTATTCCTTTGGACTCATCATTTTGCAACTCCTGACTGGCAGGACTATTCCAGTTGGGTTAGCAGGTGAAGTACGCAAGGCAGTATCATGTGGAAAATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCCTCCAGCTGTGGCAACACGATTGGTTGAACTGGGACTGCAATGCTGCCAGCAAAATGGCAGAGATAGACCAGAGCTAACGCCTACTTTGGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGACCGACCAGTGCCATCATTTTTCTTATGTCCAATCCTTCAGGTTGCAGCAGACGGATTCACTTACGAAGGGGAAGCCATACGTTAA 690 0.4522 MSTYPMGVFKTSYSGKTAIPLTWNSRARMIADIASALCFLHTSKPKTIVHGDLKPETILLDSALTCKICEFGFCRLLTEESFYRPSFRFSAELKSTSPYTDPESERTGLLTRKSDIYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLSSILDSSAGEWPPAVATRLVELGLQCCQQNGRDRPELTPTLVRELEQLHVSEDRPVPSFFLCPILQVAADGFTYEGEAIR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1414 229 SMART serkin_6 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1414 229 Pfam Protein tyrosine and serine/threonine kinase 20 187 IPR001245 GO:0004672|GO:0006468
Lele31g1414 229 PANTHER OS02G0152300 PROTEIN 15 229 - -
Lele31g1414 229 SUPERFAMILY Protein kinase-like (PK-like) 16 202 IPR011009 -
Lele31g1414 229 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1414 229 Gene3D Transferase(Phosphotransferase) domain 1 11 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1414 Lele-ChrLele31 19796629 19797537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1414 20 229 U-box Gene Family AT2G45910 43.231 3.97e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele31g1414 Pkinase 4.3e-19 CL0016