Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1411 ATGTGTGAAAGTGACAGGTTGGAGGTGGGGAAAGCGGAAGATCTCCAGGTGAATTTCTCTTCTGCAACATTCATCCCTTGCATTTCCCTATTTCTGAATTCAAATTCTGCTTCCCAATTATGTCCTTTTGCCCCTCTGAAACTTGAATTCCCTCCGCTACTCTCAATATCAATCGATGCTTGTGGATCTGTGCCTGCGGTTCGTGAAGCTGGATTCGCTGGAGACGATGCTCCAAGGGCGGTGTTCCCCAGCATTGTTGGCCGTCCACGTCACACGGGTGTGATGGTCGGGATGGGCCAGAAAGATGCGTATGTAGGAGATGAAGCTCAGTCGAAGCGTGGTATATTGACTCTGAAATATCCCATCGAGCATGGTATTGTGAGTAACTGGGATGACATGGAAAAGATCTGGCACCACACCTTCTACAATGAACTCCGTGTCGCCCCAGAGGAGCACCCCGTTTTACTCACCGAAGCACCCCTCAATCCCAAGGCTAATCGTGAGAAAATGACCCAAATCATGTTCGAGACCTTCAACACCCCCGCCATGTACGTCGCCATCCAGGCCGTTCTCTCCTTGTACGCCAGTGGCCGTACAACTGGTATTGTTCTGGACTCTGGAGATGGTGTGAGCCACACTGTGCCCATATACGAGGGCTATGCCCTACCACATGCCATTCTGCGTCTTGACTTGGCAGGGCGTGACCTCACTGATGCTTTAATGAAGATTCTGACGGAGCGTGGTTATTCCTTCACCACCACCGCTGAGCGTGAAATCGTGAGGGATGTGAAGGAGAAGCTGGCTTATATTGCCCTTGACTATGAACAAGAGCTTGAAACTTCAAAGACCAACTCTGCCGTTGAGAAGAGCTATGAGTTGCCCGACGGACAGGTCATCACCATCGGCGCTGAGCGTTTCCGATGTCCTGAGGTCCTCTTCCAGCCGTCCATGATCGGAATGGAAGCTGCGGGCATTCATGAGACCACGTACAATTCTATCATGAAGTGCGATGTTGATATCAGGAAGGACTTGTACGGGAACATTGTGCTCAGCGGGGGATCTACCATGTTCCCGGGGATTGCTGACAGAATGAGCAAGGAAATCACCGCTTTGGCCCCGAGCAGCATGAAGATCAAGGTGGTTGCTCCGCCGGAGAGAAAGTACAGTGTCTGGATCGGTGGCTCCATCTTGGCTTCTCTCAGCACTTTCCAACAGGTTCGGATCTTCTTCTTACCATGCCATGAACTCTAG 1251 0.5124 MCESDRLEVGKAEDLQVNFSSATFIPCISLFLNSNSASQLCPFAPLKLEFPPLLSISIDACGSVPAVREAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTNSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVRIFFLPCHEL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1411 416 PRINTS Actin signature 100 111 IPR004000 -
Lele31g1411 416 PRINTS Actin signature 77 86 IPR004000 -
Lele31g1411 416 PRINTS Actin signature 287 303 IPR004000 -
Lele31g1411 416 PRINTS Actin signature 191 210 IPR004000 -
Lele31g1411 416 PRINTS Actin signature 112 134 IPR004000 -
Lele31g1411 416 PRINTS Actin signature 166 179 IPR004000 -
Lele31g1411 416 PANTHER ACTIN 62 403 IPR004000 -
Lele31g1411 416 ProSitePatterns Actins and actin-related proteins signature. 155 167 IPR020902 -
Lele31g1411 416 Gene3D - 189 389 - -
Lele31g1411 416 FunFam Actin, alpha skeletal muscle 55 221 - -
Lele31g1411 416 Gene3D - 70 408 - -
Lele31g1411 416 SUPERFAMILY Actin-like ATPase domain 69 204 IPR043129 -
Lele31g1411 416 Gene3D Actin; Chain A, domain 4 231 322 - -
Lele31g1411 416 FunFam Actin, muscle 231 322 - -
Lele31g1411 416 FunFam Major actin 309 389 - -
Lele31g1411 416 SMART actin_3 64 409 IPR004000 -
Lele31g1411 416 SUPERFAMILY Actin-like ATPase domain 198 407 IPR043129 -
Lele31g1411 416 CDD NBD_sugar-kinase_HSP70_actin 125 232 - -
Lele31g1411 416 Pfam Actin 70 408 IPR004000 -
Lele31g1411 416 ProSitePatterns Actins signature 1. 104 114 IPR004001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1411 Lele-ChrLele31 19787180 19790976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1411 61 408 Cytoskeleton Gene Families AT3G12110 93.966 0.0 683