Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1404 ATGGATCAGGGCGGTGAGAACAATGGGTCGAGTGGGAGCAATGGAGGAGGAGGGGGTTCTCGATGGAACCCTACAAAAGAGCAAATAAATATGTTGGAGAATCTGTATAAGCAAGGGATAAGGACGCCCAGTGCTGAGCAGATTCATCAAATAACTGCGAGGCTCAGGGTCTTTGGTCACATCGAAGGCAAGAATGTCTTCTATTGGTTTCAGAATCACAAAGCCAGGCAGCGACAGAAGCAGAAGCAAGAAACCTTTGCTTACTTCAATCGCTTTCTTCATCCCTCACCTCATCAACATCCGCCCCTCTTCTCTCCCCTACTTTACCCTAATAATGGAGCAGGCATTAGAAGGACGGTGCCCAGAAACTGTGAGGTATATCAACAAATGCAGGACAATACCGTAATGTCGCATGATGGGCGCTTGTGGAACAAAGAAACGCTTGCGCTTTTCCCACTGCAGCCAACTGGCTTTCTGGAAGACAAAACTTTATTTTCTGTTGATGCTACTAATTCAGCTTCTGTTTCTCCGGCTCATCATCACAATGATGAAGAAGATGCCCCACCAGGAAACCAGCCTTTCTTTGATTTTCTTTCTTCTTCAGGCCAAGAGTTTCTGCATAGAAAGTAA 630 0.4603 MDQGGENNGSSGSNGGGGGSRWNPTKEQINMLENLYKQGIRTPSAEQIHQITARLRVFGHIEGKNVFYWFQNHKARQRQKQKQETFAYFNRFLHPSPHQHPPLFSPLLYPNNGAGIRRTVPRNCEVYQQMQDNTVMSHDGRLWNKETLALFPLQPTGFLEDKTLFSVDATNSASVSPAHHHNDEEDAPPGNQPFFDFLSSSGQEFLHRK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1404 209 Pfam Homeodomain 20 79 IPR001356 GO:0003677
Lele31g1404 209 MobiDBLite consensus disorder prediction 173 194 - -
Lele31g1404 209 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 98 IPR044555 GO:0003700|GO:0099402
Lele31g1404 209 CDD homeodomain 21 81 IPR001356 GO:0003677
Lele31g1404 209 FunFam WUSCHEL-related homeobox 4 19 86 - -
Lele31g1404 209 Gene3D - 19 88 - -
Lele31g1404 209 SUPERFAMILY Homeodomain-like 12 87 IPR009057 -
Lele31g1404 209 SMART HOX_1 17 84 IPR001356 GO:0003677
Lele31g1404 209 MobiDBLite consensus disorder prediction 1 25 - -
Lele31g1404 209 ProSiteProfiles 'Homeobox' domain profile. 15 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1404 Lele-ChrLele31 19740685 19741805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1404 15 164 Wox Gene Family AT5G59340 50.993 3.02e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele31g1404 Homeodomain 1.1e-18 CL0123