Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1402 ATGGCGAAGATATTAATTTCCTCTCCTGCGTTCATCGGCACGCCTCTTCCTTCTATCTCTCGCCGTGGTCTGCACCCCTTCCCTCTCCCTCATCGTAGGCTGGTCAGCACTAGAGTTAAATTCAGCTTCCACGAAATCCCCCCTATTCACTCCCTCAATGATTCCTTTGACTTCAGTCAAATCGTGACCAGAGCTGAAGCGCTTCTTTATACGCTTGCTGATGCCGCGGTTTCCGCCGATTCAGGGGCTGGTGCTGCCGCATCGACCTCCACAGATGTTGCCGCACAGAAGAACGGAGGATGGTTCGGTTTTATTTCTGAAGCCATGGAATTTGTCCTCAAGGTGTTAAAAGACGGCCTTAACGCCGTGCAAGTGCCTTATGCATATGGATTTGCTATAATATTGCTCACTGTTATTGTTAAAGTTGCTACACTTCCCTTGACGAAGCAACAGGTTGAATCAACACTTGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATCCAAGAAAGACACGCTGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATACAAGCAAGCTGGTGTTAATCCATTGGCTGGTTGTTTACCGACTTTGGCTACCATTCCTGTCTGGATAGGTCTATACCAAGCTTTATCAAATGTGGCAAATGAAGGACTTTTGACAGAAGGATTTTTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCCGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCGTTGGGCTGGCAAGACACGGCAGCATATCTTGTTTTACCCGTCCTTCTTGTTGTTTCTCAATATGTTTCTATGGAAATAATGAAACCCCCCCAGACTGATGATCCAGCTCAAAAAAATACACTTCTTATTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCTCTGTCTGTCCCTTCAGGGCTATCAATTTACTGGTTTACAAACAATGTTTTAAGCACATCACAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCAAGTGGAATTATTACTGCAGGACGTGCTAAACGATCAGTTTCTCAGCCAGAAAGAACCGGTGAGAGGTTTAAACAGTTAAAGGAAAAGGAGAAAAAGAAGTTAAACAAGGCACTGCCTCAAGAAGAGGCTCAACCTCTGGCTTCTGTTTCTGATTTAGATGGTGGTTCTGATGAAGAGAGTGATGACAAGAATGACGAAGTTGAAGAAGAAGCATATGCTTCGACAGTAAACAAGAAGGTTCCAAATTTTAGGGAAAGAAGAAGCAAACGCTCAAAGCGGAAGCGGGCTGTATAA 1359 0.44 MAKILISSPAFIGTPLPSISRRGLHPFPLPHRRLVSTRVKFSFHEIPPIHSLNDSFDFSQIVTRAEALLYTLADAAVSADSGAGAAASTSTDVAAQKNGGWFGFISEAMEFVLKVLKDGLNAVQVPYAYGFAIILLTVIVKVATLPLTKQQVESTLAMQNLQPKIKAIQERHAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTSQQVWLRKLGGAKPVVNENASGIITAGRAKRSVSQPERTGERFKQLKEKEKKKLNKALPQEEAQPLASVSDLDGGSDEESDDKNDEVEEEAYASTVNKKVPNFRERRSKRSKRKRAV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1402 452 PANTHER OXA1 72 388 IPR001708 GO:0016020|GO:0032977
Lele31g1402 452 MobiDBLite consensus disorder prediction 438 452 - -
Lele31g1402 452 Coils Coil 379 399 - -
Lele31g1402 452 MobiDBLite consensus disorder prediction 382 452 - -
Lele31g1402 452 MobiDBLite consensus disorder prediction 409 423 - -
Lele31g1402 452 Pfam 60Kd inner membrane protein 129 343 IPR001708 GO:0016020|GO:0032977
Lele31g1402 452 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 129 342 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1402 Lele-ChrLele31 19726452 19730394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1402 29 396 Chloroplast and Mitochondria Gene Families AT2G28800 71.011 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0151 29 836850 840821 Lele31g1402 31 19726452 19730394 hybridization
Lele30g1256 30 15169254 15173571 Lele31g1402 31 19726452 19730394 hybridization