Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1370 ATGCTCAGAGCGAGCCCGCAAGCTCAAACGGCTCCTCCTCCTCCAGATTCGTCTACTGCTGCCGGGCTTTCATATTTGGTTCTTTCCGATTTTGGTGCTTATCTGAAGAGTGTTAAAGAACTACAGGCCTGTAGAAATTCCAAAGCTGCAAAGAAGGGGAATACAAGAGCATCTCACTGCTTCGTTCCACAGGACAGTTATCTTATAGACTGTGGAGCAGCTTCAAATACTTCATTTGATCGCCTCAATTTCGCAGCGGATTCATTCTACAAGGATCTCCTTTCTACCAAACGTGATGTTCTCGCCACTACCTCTGTCGATTCACCTCTCTATCAAACAGCAAGAATCTTCAGTGAACCGGCAAAGTACACATTCTCGATCAGCCAAAAGGGGAGACATTGGATCCGTCTCTATTTCTATCCATTTGAGTATCAGAACTTCGATATGAGTACTGCAAATTTTGCTGTCACTACCCAAAACAATATCCTTCTCACTAACTTCTCCGTGCAGAAAAATCCTGTCGTGAAGGAATACTCCGTGAATGTGACTTCAGACACCCTTGTGATCACCTTTACTCCTTCCAGCAATTCCATTGCGTTCATAAATGCCATTGAAGTTGTTTCAGTACCCGATGAACTCATTGCCGAGGACGCTTCCACCATAAATCCACGGGAAAGTTTCTCTGGGTTGGTGACCCTGGCATTTGAGACCGTTTGGAGGATTAACATGGGTGGCCCATCTATCTCCTCTGCAAATGATACCCTCCACCGGTCCTGGGTACCAGACCAAAATTTTCTTGTCAATCCTGACCTTGCTACCGATTTTACAAATATGGCTGCAGTTAACTATCTAGAAGGTGGGGCAACAGAGAATATTGCTCCACCTACAGTCTATGGTACTGCGACAGAAATGAACTCAAGCAGTGATCCACGTAGTAATTTCAATGTGACCTGGCAGTTTGATGTAGATCCAGGATTTCAGTATCTTGTTCGACTTCACTTTTGTGACATAGTTAGCAAAAGTCTCAACGAACTTTATTTCAACGTCTATGTCAACTCCTACATGGCGGAAAAAAATTTGGATCTAAGCACTTCCAGTAACAATGTTTTGGGTGCTCCAGTTTACATGGATTATGTTACGGCCCCAACTGATGGCAAGAAAATTCGTGTAAGTGTCGGTCCTCCTTCTTTAGACAGTGATTACCCGAATGCCATTTTAAATGGGCTGGAGATCATGAAAATGAGTAATTCTAAGGGCAGTCTGAGCGTAGGAACAGCTACAATTGGTACTGGTTCAACAAACTCAAAGAAGAAAGTAGCCATGATAGTGGGTGTGGTAGTTGGGACATTGTGTGCAGTGGTCATGGCTGGATTTTTCTTTGTATTGTGCAGAAGAAAACGTTTGACACGGCAAGGTCTTTCAAAGACATGGGTTCCCTTATCCATTAATGATGGAAATTCTCATACCATGGGAAGTAAATATTCTAATGGCACAACACTAAGTGCTGCTTCCAACTTAGGGTATCGCATCCAATTTGCAGCAATTCAGGAGGCCACAAACAATTTTGATGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGAAAGTGTACAAGGGAGAACTAAATGATGGCACTAAGGTGGCAGTTAAGAGAGGGAATCCTCAGTCCCAGCAAGGGCTTGCAGAGTTCCATACTGAAATTGCCATGCTATCTCAGTTCCGTCATCGCCATTTGGTGTCATTGATAGGGTATTGTGATGACAAAAATGAAATGATATTGATATATGAATATATGGAAAAGGGAACTCTCAAGAGTCATCTCTATGGTTCAGATCTGCCAAGCTTAAGTTGGAAAGAAAGACTGGAGATCTGTATTGGAGCAGCTAGAGGACTACATTACCTTCACACTGGCTACGCCAAGGCAGTTATACATCGAGATGTGAAGTCTGCAAATATCCTGCTTGATGAGAACCTTATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACCGGGCCTGAAATTGATCAGACACATGTGAGCACAGCAGTAAAAGGAAGTTTTGGATACCTTGATCCTGAGTATTTCCGTCGGCAACAATTAACAGAAAAATCGGATGTTTATTCATTTGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTAATTGACCCATCACTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAAGGGCAATTGGAGCAAATCATAGATCGTACGCTCGCAGGGAAGATCAGACCAGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTGGAGTATACCCTTCAGCTTCAAGAGCCAGTTGTTCAAGGTGATCCTCAAGAAAACAGTACCAACATGATCGGTGAACTCTCTCCACAGATAAACAATTTCAACCACGATGCAAGTGTTTCTGCTGCTCAGCTTGAAGCTTCGGCCACAGATGACCTGTCTGGTGTTTCAATGAGTAGGGTTTTCTCACAGCTGGTGAAGTCTGAGGGGAGGTGA 2589 0.4368 MLRASPQAQTAPPPPDSSTAAGLSYLVLSDFGAYLKSVKELQACRNSKAAKKGNTRASHCFVPQDSYLIDCGAASNTSFDRLNFAADSFYKDLLSTKRDVLATTSVDSPLYQTARIFSEPAKYTFSISQKGRHWIRLYFYPFEYQNFDMSTANFAVTTQNNILLTNFSVQKNPVVKEYSVNVTSDTLVITFTPSSNSIAFINAIEVVSVPDELIAEDASTINPRESFSGLVTLAFETVWRINMGGPSISSANDTLHRSWVPDQNFLVNPDLATDFTNMAAVNYLEGGATENIAPPTVYGTATEMNSSSDPRSNFNVTWQFDVDPGFQYLVRLHFCDIVSKSLNELYFNVYVNSYMAEKNLDLSTSSNNVLGAPVYMDYVTAPTDGKKIRVSVGPPSLDSDYPNAILNGLEIMKMSNSKGSLSVGTATIGTGSTNSKKKVAMIVGVVVGTLCAVVMAGFFFVLCRRKRLTRQGLSKTWVPLSINDGNSHTMGSKYSNGTTLSAASNLGYRIQFAAIQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPQSQQGLAEFHTEIAMLSQFRHRHLVSLIGYCDDKNEMILIYEYMEKGTLKSHLYGSDLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDRTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYTLQLQEPVVQGDPQENSTNMIGELSPQINNFNHDASVSAAQLEASATDDLSGVSMSRVFSQLVKSEGR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1370 862 Pfam Protein tyrosine and serine/threonine kinase 527 721 IPR001245 GO:0004672|GO:0006468
Lele31g1370 862 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Lele31g1370 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lele31g1370 862 FunFam receptor-like protein kinase FERONIA 486 597 - -
Lele31g1370 862 Gene3D Phosphorylase Kinase; domain 1 484 597 - -
Lele31g1370 862 PANTHER OS07G0166700 PROTEIN 509 799 IPR045272 GO:0004714|GO:0006468
Lele31g1370 862 FunFam Receptor-like protein kinase FERONIA 598 813 - -
Lele31g1370 862 FunFam Receptor-like protein kinase FERONIA 234 416 - -
Lele31g1370 862 Pfam Malectin-like domain 69 414 IPR024788 -
Lele31g1370 862 Gene3D Transferase(Phosphotransferase) domain 1 598 813 - -
Lele31g1370 862 CDD STKc_IRAK 528 793 - -
Lele31g1370 862 Gene3D - 65 209 - -
Lele31g1370 862 Gene3D - 233 416 - -
Lele31g1370 862 FunFam Putative receptor-like protein kinase 66 210 - -
Lele31g1370 862 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Lele31g1370 862 SMART serkin_6 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1370 862 ProSiteProfiles Protein kinase domain profile. 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1370 Lele-ChrLele31 19544397 19547651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1370 59 862 Receptor kinase-like Gene Family AT3G46290 65.929 0.0 1100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele31g1370 Malectin_like 4.8e-44 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0182 29 1030163 1032667 Lele31g1370 31 19544397 19547651 hybridization
Lele30g1224 30 14977587 14980236 Lele31g1370 31 19544397 19547651 hybridization