Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1358 ATGCTTTCGCTCCCGACTCTGAACTCATCGCCGAGGAAATTACGAATGCAATTTCTCTTGGCTCAAGCGAAGTGTAATCCCTATCGAAGTTTGACAACCATGTTAGATCTTAATCTTAATGCGGATTCGACCGATTCGACTCAGAACCAGGACTCCATCATGTTCTTTGACAAATTTCCTGAAGCTTCGGCGAATCAGATGGCGGAATCGGGGACCTCTAATTCATCTGTTGTCAATGCCGACGGGTCCAGTACTGGAGGAGGCGACGATGACTCTTGCTCTACACGCGCTGGCGACGTAGTTACCTTCAATTTTAATATCCTTAAGGTGGATGGTGGTAACGACGTCGCAACCAGGGAGCTGTTTCTGGTGAGTGGAGCCAAAGGAGTGGATGGCGACTCTGGGAATTGGCAGGGTCAGTCTTCATCGCCCTTTCCATCAAATAAGAGCTGGATGGATCTCTCATTCGATAGCGAAAATGGCAGCACAGAGGCAAAGATGATTCAACTTCAGCAGCAACCTAAGCCGCAGGTGAAGAAGAGCAGGAGAGGTCCAAGGTCTCGGAGCTCCCAGTACAGAGGAGTCACCTTCTATAGGAGAACTGGAAGATGGGAATCGCATATCTGGGACTGCGGGAAACAAGTCTATTTAGGCGGTTTTGACACTGCACACGCCGCTGCTAGAGCCTACGATCGAGCTGCTATTAAATTCAGGGGAGTTGAAGCTGATATCAATTTCGACCTCAGTGATTATGAGGAGGATCTTAAACAGATGAAGAATCTCACGAAGGAGGAGTTTGTTCACATTCTTCGTCGCCAAAGTACTGGTTTCTCTAGGGGTAGCTCAAAATACCGGGGGGTAACACTGCACAAATGTGGACGCTGGGAAGCTCGGATGGGACAATTTCTTGGCAAAAAGTATATATACCTTGGGCTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCATACGATAAAGCAGCCATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCAAGTACTTATGAAGGGGAGTTGAATACTGAAGCGACCAATGAAGGTGTCAGTCACAATCTTGACCTCAATTTAGGCATAGCAACCCCAGGTAAAGGTCCCAATGAAAGCAGGGGCAATCCTGAGCTCCAGTCTTTTCCTTACAATATGCATGCCAGAACAAGTTCAAGGATAGAGAGCAACACCGACTCAGTAATTGGCGATCAAGCTATGAAAAAGCTTGTTGTTTCTGGAGATCGCCCTTCTATATGGAATGGGATATATCCAAATTTCTTTCCCAGTGAGGAAAGAGCAGAGAGAATGAGCACAGGACAGCCCAACTGGACGTGGCAAAGGCATGGCCTGCTAAGTGGGAGCCCAGTTCCACAGTTCTCTACTGCAGCATCATCAGGATTCTCCATTTCATCAACTGCCATCTTCCCGCCCAAACCTACCAACTCACTTCCCCTCACTCTCTCCTTTTCTTCTCCATCCACTTCAGCTGCCCACCCCGCATCTCAATATTATTACCACATGAAGCACCCGCAACCGCCACACTAG 1560 0.4814 MLSLPTLNSSPRKLRMQFLLAQAKCNPYRSLTTMLDLNLNADSTDSTQNQDSIMFFDKFPEASANQMAESGTSNSSVVNADGSSTGGGDDDSCSTRAGDVVTFNFNILKVDGGNDVATRELFLVSGAKGVDGDSGNWQGQSSSPFPSNKSWMDLSFDSENGSTEAKMIQLQQQPKPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFDLSDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGELNTEATNEGVSHNLDLNLGIATPGKGPNESRGNPELQSFPYNMHARTSSRIESNTDSVIGDQAMKKLVVSGDRPSIWNGIYPNFFPSEERAERMSTGQPNWTWQRHGLLSGSPVPQFSTAASSGFSISSTAIFPPKPTNSLPLTLSFSSPSTSAAHPASQYYYHMKHPQPPH 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1358 519 SMART rav1_2 283 346 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 SMART rav1_2 191 253 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 149 383 - -
Lele31g1358 519 PRINTS Ethylene responsive element binding protein signature 284 295 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 PRINTS Ethylene responsive element binding protein signature 322 342 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 SUPERFAMILY DNA-binding domain 190 248 IPR016177 GO:0003677
Lele31g1358 519 MobiDBLite consensus disorder prediction 132 192 - -
Lele31g1358 519 ProSiteProfiles AP2/ERF domain profile. 283 340 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 MobiDBLite consensus disorder prediction 134 178 - -
Lele31g1358 519 CDD AP2 282 342 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 Gene3D AP2/ERF domain 282 341 IPR036955 GO:0003700|GO:0006355
Lele31g1358 519 Gene3D AP2/ERF domain 190 249 IPR036955 GO:0003700|GO:0006355
Lele31g1358 519 MobiDBLite consensus disorder prediction 65 92 - -
Lele31g1358 519 SUPERFAMILY DNA-binding domain 282 341 IPR016177 GO:0003677
Lele31g1358 519 ProSiteProfiles AP2/ERF domain profile. 191 247 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 Pfam AP2 domain 282 332 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 Pfam AP2 domain 191 239 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 CDD AP2 191 249 IPR001471 GO:0003700|GO:0006355
Lele31g1358 519 FunFam AP2-like ethylene-responsive transcription factor 190 249 - -
Lele31g1358 519 FunFam AP2-like ethylene-responsive transcription factor 282 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1358 Lele-ChrLele31 19444099 19447717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1358 139 366 AP2-EREBP Transcription Factor Family AT4G36920 73.418 1.25e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele31g1358 AP2 3.1e-09 CL0081