Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1352 ATGGATTACATCGACAACTTGCCGCCGATGGATCTGATGCGTTCCGAGAAAATGACCTTCGTTCAACTTATCATGCCCGTCGAGTCCGCTCATCGAGCTATCTCTTATTTGGGCGAACTTGGCCTCCTCCAATTCCGAGATTTGAACGATGATAAAAGCCCCTTCCAAAGAACCTTTGCTAATCAGGTAAAGCGGTGTGCAGAAATGTCTAGAAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGTGTGATGTGTTCTCCTAGCCTTGCCTTGCAGCCTGATATTGAGTTAGAGGAACTAGAGATACAGCTTGCTGAACATGAACATGAGCTAAATGAAATGAACTCTAATAGTGAGAAACTTAAGCAGTCACATAATGAGCTCCTGGAGTTCAAGATTGTATTGCAGAAGGCATGTGGTTTTGTTGCATCAAGTCATAGCCATGCTGCTATAGAGGAGAGAGAACTGGAGGAGCATGTACACTCTAATAATGATGATTATGTTGAGAACACATCTTTGCTTGAACAGGAAACAAGGCCTGGATCGTCAAATCAATCTGGTTTAAGATTTATCAGTGGGATAGTTTGTAAATCTAAAGTTCTTAGGTTTGAAAGGATGCTTTTTCGTGCTACAAGAGGCAATATGCTTTTCAACCAGGCACCAGCTGATGAACAAATCATGGATCCTATTTCAACAGAGATGGTTGAGAAAACAGTGTTTGTTGTATTTTTCTCCGGGGAGCAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTGCCTGAAGATATGCATAAACATAGGCAAATAACTAGGGAGGTTTCATCACGTCTTGTTGACTTAGAAGCAACTTTGGATGTTGGTATTAGGCACAGGAATAAGGCTCTTGCTTCCATAGGGGGCCATTTAGCAAAATGGATAAATATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTCAACATGCTTAATTTTGATGTCACAAAAAAATGCCTTGTTGGAGAGGGATGGTACCCCATATTTGCAAAAACACAGATCCAAGAGGCACTGCATCGTGCAACTTTTGATAGTAATTCTCAAGTTGGCATAATCTTTCATCCAATGGATGCAGTGGAATCACCACCTACTTATTTTAGAACCAACCGCTTCACCAGTGCTTTCCAGGAAATTGTTGATGCATACGGTGTTGCAAGATACCAAGAAGCAAACCCTTCAGTTTTCACAGTAATTACATTCCCATTTCTTTTTGCTGTGATGTTTGGGGACTGGGGTCATGGAATCTGCCTGTTGCTAGGAGCATTATTTCTAATAGCACGCGAAAGCAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGAGGGCGCTATGTGCTTCTTTTGATGGCACTGTTTTCAATCTATTGTGGGCTAGTCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGTAGATCTGCTTATGATTGCCGAGATACTTCGTGCAGGGATGCACATACTGCTGGCTTAGTCAAATACCATGATACATATCCATTTGGTGTAGATCCCAGCTGGCGAGGAAGTCGATCAGAATTGCCTTTTCTGAACTCACTCAAGATGAAGATGTCCATTCTTTTGGGAGTGGCACAAATGAACTTAGGAATTCTATTAAGTTACTTCAATGCTCGTTTCTTTGGTAACTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTACCTTTCCCTTCTCATTATTGTTAAGTGGTGTACTGGGTCTCAGACAGACCTCTATCATGTAATGATTTACATGTTTTTAAGTCCCACTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGTTTCTTCAGATTATGTTATTGCTGTTGGCTGTAGTTGCTGTTCCATGGATGCTCTTTCCAAAACCTTTTATATTAAAGAAGCTTCAAACAGAGAGATATCAAGGAAATGCTTATGATAGGCTTAACACATCCGAGATGGATATTGAGGTGGAACCAGATTCTGCTAGGACTAGGCAACACCATGAGGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATTGAGTTTGTCCTTGGTGCAGTTTCAAATACAGCATCATACCTTAGACTCTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAAAAAGTCCTCCTCCTTGCTTGGGGGTATGACAATCTGGTCATTCGGTTAGTGGGCCTAGCTGTTTTTTCGTTTGCAACCGCCTTTATACTACTAATGATGGAGTCGCTAAGTGCTTTCCTACATGCCCTGCGTCTTCACTGGGTGGAATTTCAAAATAAATTCTACCATGGGGATGGCTATAAGTTCAGACCCTTTTCCTTTGCCTCATTAGCTGAGGATGATGATTGA 2466 0.4132 MDYIDNLPPMDLMRSEKMTFVQLIMPVESAHRAISYLGELGLLQFRDLNDDKSPFQRTFANQVKRCAEMSRKLRFFKDQINKAGVMCSPSLALQPDIELEELEIQLAEHEHELNEMNSNSEKLKQSHNELLEFKIVLQKACGFVASSHSHAAIEERELEEHVHSNNDDYVENTSLLEQETRPGSSNQSGLRFISGIVCKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDMHKHRQITREVSSRLVDLEATLDVGIRHRNKALASIGGHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWYPIFAKTQIQEALHRATFDSNSQVGIIFHPMDAVESPPTYFRTNRFTSAFQEIVDAYGVARYQEANPSVFTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLVYNEFFSVPFHIFGRSAYDCRDTSCRDAHTAGLVKYHDTYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVAQMNLGILLSYFNARFFGNSVDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQTDLYHVMIYMFLSPTDNLGENQLFWGQRFLQIMLLLLAVVAVPWMLFPKPFILKKLQTERYQGNAYDRLNTSEMDIEVEPDSARTRQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFSFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLAEDDD 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1352 821 PIRSF ATP6V0A1 8 821 IPR026028 GO:0000220|GO:0046961
Lele31g1352 821 PANTHER VACUOLAR PROTON ATPASES 12 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele31g1352 821 Pfam V-type ATPase 116kDa subunit family 36 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele31g1352 821 Coils Coil 99 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1352 Lele-ChrLele31 19413064 19420944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1352 2 814 Primary Pumps ATPases(2) AT2G28520 79.730 0.0 1339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0199 29 1157548 1165333 Lele31g1352 31 19413064 19420944 hybridization
Lele30g1206 30 14819218 14828754 Lele31g1352 31 19413064 19420944 hybridization