Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1342 ATGGAGTCCGTCAGTGATCCCATCCCAAACACTCCAAGTCCCACTTCATCTATACCTCTCTCTAACTCTCCTAATTCTTCGCCATCTTCTTCCCCTCCAAATCCAATACCTCCACAAGTTGTCGTTAGCCCTTGTGCTGCTTGTAAGACTCTAAGACGCAGATGTGCGGAAAAATGCGTTCTCGCTCCTTATTTCCCTCCTTCTGAACCCGCCAAGTTCACCATTGCTCACCGAGTCTTCGGTGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCGCAGAGAGCCGATGCGGTGAGCAGCATGGTGTACGAGGCGAGTGCAAGAATAAGAGACCCAGTGTATGGTTGTGCGGGTGCGATTTGTCAGCTTCAGGAGCAAGTGAACGAGCTTCAGGCTCAGTTGGCTAAGGCTCAAGCCGAGCTTGTGAACATGCAAATGCAGCAAGCCAATATGGCGGCACTTCTCTGCATGGAAATGGCACAAACTGAGACTGAAACTTCTCCTTCAAGTACTCCTCCTCAGGAATATTATTCTTCACCGCCGTCATCATCATTCGAAGATACGAACTTCATTAATTCAAGCAACCTCAACTTCTTCGCGGAAAGCACGGGCCTTAACTCTTTGTGGGAGCAGCCACTTTGGACATGA 657 0.4932 MESVSDPIPNTPSPTSSIPLSNSPNSSPSSSPPNPIPPQVVVSPCAACKTLRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQEQVNELQAQLAKAQAELVNMQMQQANMAALLCMEMAQTETETSPSSTPPQEYYSSPPSSSFEDTNFINSSNLNFFAESTGLNSLWEQPLWT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1342 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 43 180 - -
Lele31g1342 218 ProSiteProfiles LOB domain profile. 43 144 IPR004883 -
Lele31g1342 218 MobiDBLite consensus disorder prediction 165 186 - -
Lele31g1342 218 Coils Coil 123 150 - -
Lele31g1342 218 Pfam Lateral organ boundaries (LOB) domain 44 141 IPR004883 -
Lele31g1342 218 MobiDBLite consensus disorder prediction 1 25 - -
Lele31g1342 218 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1342 Lele-ChrLele31 19360829 19361949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1342 39 218 AS2 family AT1G07900 62.088 5.46e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele31g1342 LOB 2.3e-41 No_clan