Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1321 ATGTTCAAAAAGAGTTTCTCTATTGCAATAGCGATGGACTGTTGTGGTTGCTTTGGGTTCATAAGAAAATTCAAACGTCGCAGAAATCAGTCTGGCTTCAAGAGTAATCTCTCTCAGGAGCCATTGTTGGATGAAACTGACGACAGAGATGATGATGGATCCTATAATGGTGATGTTACTGACGCCATTAGTGGAGACGATAGTGAAGTTCCAATTTGTGCCAAACGTTCTGAGGAAATTTTAATGTTGAGAGAAGAGAAAGATATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTCGCTCAGAGGATGAAAATGGTAACAAGATGGTAAATGAATATGTTCGGGAGTACAAGATTGGTTCTGGTAGTTATGGGAAAGTGGTTTTATACCGAAGTTATGTGGATGGAAAGCATTATGCAATCAAGGCCTTTCATAAGTCTCACTTACAGAAGCTTCGGGTTGCACCCTCAGAGACTGCCATGACTGATGTTCTGCGGGAGGTACTCATCATGAAAATGCTGGAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATCACTTCTACATGGTACTTGAATATGTAGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCCTTCTTGTAGCTTGGGTGAGGAGACCGCTAGGAAATACTTGCGTGATATAGTTTCAGGATTAAGATACCTTCATGCTCATAATATAGTGCACGGGGATATTAAACCTGATAATCTGTTGGTTACTCGTCATGGTACAGTAAAGATTGGGGATTTCAGTGTTAGCCAGGCTTTTGAGGATGATAATGATGAACTTCGCCGATCACCTGGGACTCCTGTTTTCACTGCTCCAGAATGTTGTTTAGGTCTTACCTATAACGGCAAAGCTGCAGACACTTGGGCAGTTGGAGTTACTTTGTACTGCATGATCTTGGGTGAATACCCATTTCTTGGTGACACGCTTCAAGATACTTATGACAAAATAGTCAATAATCCTTTAGTGCTTCCAGATGATTTGAATCCCCAAATAAGAAACTTACTGGAAGGATTACTTTGCAAAGATCCAAAACATCGGATGACATTGGGTGATGTTGCACAGCATAGCTGGGTTATTGGAGATGATGGGCTAATTCCTGAATATTTGTGTTGGTGCAAACGCAAGAGATTAGGAGGAGAAGGAGGTTTAAATAGCAACAACATACTTGCTTGA 1233 0.4104 MFKKSFSIAIAMDCCGCFGFIRKFKRRRNQSGFKSNLSQEPLLDETDDRDDDGSYNGDVTDAISGDDSEVPICAKRSEEILMLREEKDMICRQFPVKETHKVVRSEDENGNKMVNEYVREYKIGSGSYGKVVLYRSYVDGKHYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGSGPSCSLGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYNGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDLNPQIRNLLEGLLCKDPKHRMTLGDVAQHSWVIGDDGLIPEYLCWCKRKRLGGEGGLNSNNILA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1321 410 FunFam Serine/threonine-protein kinase GRIK2 107 403 - -
Lele31g1321 410 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 74 379 - -
Lele31g1321 410 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Lele31g1321 410 SUPERFAMILY Protein kinase-like (PK-like) 108 387 IPR011009 -
Lele31g1321 410 SMART serkin_6 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1321 410 FunFam Serine/threonine-protein kinase Ssp1 111 213 - -
Lele31g1321 410 ProSiteProfiles Protein kinase domain profile. 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1321 410 MobiDBLite consensus disorder prediction 35 66 - -
Lele31g1321 410 Gene3D Transferase(Phosphotransferase) domain 1 215 383 - -
Lele31g1321 410 CDD STKc_LKB1_CaMKK 123 378 - -
Lele31g1321 410 Gene3D Phosphorylase Kinase; domain 1 111 213 - -
Lele31g1321 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Lele31g1321 410 Pfam Protein kinase domain 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1321 Lele-ChrLele31 19248968 19252393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1321 112 377 CBL-interacting serine-threonine protein kinases AT5G35410 32.707 3.80e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Lele31g1321 Pkinase 1.3e-58 CL0016