Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1320 ATGTCAAGAGAATTTGAATCCGAGGATCAATTCAGGAGCATAAAGGGGAAAATAAACCACACCATTGACTTTACTATTGATGTTCCTTTATCTCAAAACCCAACTTCACCCTTCCCTATAATCGCCGGTGACCGGCAAGATGCTCTGACGCCACCATTATTCTCGTCCAATCATGCGGCGGTTCTGTGTCTGAGATCCAAACGTTTTTCTTCCTTCCCATTTATTCTGTCTCGACACCTGGAATTTGGTCGTGGAAAATTTCCGGGAGCTCTCGCTAATTGGCTGGAAGATGAAGAGAAAGTGAAAAAGATTTTGAAAATGAATTCAAGGGGAGGAGTGAATGATGGTCGAACTAGAATTGAACCAAATGATTCTCTTCTTCCTGGTCTTAGCGATGATGTTGCCCTGAATTGTCTTGCGTGGGTTAGTAGATCGGATTATGCTTCTCTATCTTGTATAAATAAAAGATACAATAAGCTGATTAAAAGTGAGTATTTATATGGGTTGAGGAAACAATTGGGACTTGTGGAGCATTGGGTTTATTTGGTGTGTGATCCAAGGGGATGGGAGGCATTTGATACCATGAAAAAGAAATGGATGGCATTACCTAAGATACCGTGTGATGAATGCTTCAACCATGCAGACAAGGAGTCCTTGGCTGTGGGCAGTGAGCTACTGGTATTTGGTCGGGAATTGTTGGATTTTGCTATTTGGAAATATAGCTTGATTTTTCATGGTTGGGTTAAGTGTCAGGGGATGAATCGGCCGCGCTGTTTGTTTGGATCTGGTAGTCTCGGCTCAACTGCCATTGTTGCAGGTGGAAGTGATAAAAATGGAAATGTTCTAAAATCAGCTGAGTTGTATGACTCTTCGTCTGGTAGATGGGAACAGTTACCAAACATGCACACACCACGTAGATTATGCTCTGGTTTTTTCATGGATGGCAAATTCTATGTGATTGGTGGAATGTCAAGTCCTACAGTTTCATTGACCTGTGGAGAGGAGTATAATCTTGAGACGAGAAGTTGGCGGAAAATTGAGGATATGTATCCATTTGTCAATGGAGCTGCTCAGGCACCCCCACTTGTGGCCGTTGTGGACAACCAGTTATTTGCTGTGGAGCATCTAACCAACATGGTGAAGAAGTACAACAAGGTAAAGAATGCCTGGGATGAATTGGGAAGGCTTCCAGTCCGGGCTGATTCTTCTAATGGATGGGGCTTGGCTTTCAAGGCTTGTGGGAAGCACCTTCTTGTTGTGGGTGGTCAGAGAGGTCCTGAAGGCGAAGCTGTTGTGCTGAATTCCTTTTGCCCTGCATCAGGGGTAGAAAATGGCACCTTAGATTGGCAGGTTCTTGCTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGTTGTTGA 1413 0.4395 MSREFESEDQFRSIKGKINHTIDFTIDVPLSQNPTSPFPIIAGDRQDALTPPLFSSNHAAVLCLRSKRFSSFPFILSRHLEFGRGKFPGALANWLEDEEKVKKILKMNSRGGVNDGRTRIEPNDSLLPGLSDDVALNCLAWVSRSDYASLSCINKRYNKLIKSEYLYGLRKQLGLVEHWVYLVCDPRGWEAFDTMKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELLDFAIWKYSLIFHGWVKCQGMNRPRCLFGSGSLGSTAIVAGGSDKNGNVLKSAELYDSSSGRWEQLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYNLETRSWRKIEDMYPFVNGAAQAPPLVAVVDNQLFAVEHLTNMVKKYNKVKNAWDELGRLPVRADSSNGWGLAFKACGKHLLVVGGQRGPEGEAVVLNSFCPASGVENGTLDWQVLAVKEHVGVFVYNCAVMGC 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1320 470 Gene3D - 176 450 IPR015915 GO:0005515
Lele31g1320 470 Pfam Kelch motif 256 301 IPR006652 GO:0005515
Lele31g1320 470 Pfam Kelch motif 304 349 IPR006652 GO:0005515
Lele31g1320 470 SUPERFAMILY F-box domain 122 211 IPR036047 GO:0005515
Lele31g1320 470 FunFam F-box/kelch-repeat protein SKIP11 172 454 - -
Lele31g1320 470 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 121 470 - -
Lele31g1320 470 SMART kelc_smart 268 315 IPR006652 GO:0005515
Lele31g1320 470 SMART kelc_smart 316 368 IPR006652 GO:0005515
Lele31g1320 470 SUPERFAMILY Kelch motif 187 425 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1320 Lele-ChrLele31 19234625 19236746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1320 121 347 Miscellaneous Gene Families AT4G33900 26.271 4.49e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0230 29 1330317 1331904 Lele31g1320 31 19234625 19236746 hybridization
Lele30g1180 30 14656876 14658931 Lele31g1320 31 19234625 19236746 hybridization