Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1317 ATGAATATTGCGACCAGAATAGCATCACAAGCACTGCCTCTTCTCTGCAATCGTCCCGTTCCCACCTTCTCTTTCCTAGAAAATTGCAATTGTACTTTAGGTATCCGCAAGTTGGGGTTTGTGCCCCAGTTAAAACAGAGTGGGAGGCTGAACAGAAACTTGCCCATAAATATGGCTTGGAGTGTGGAGAATTCTGATGTGCGTGTTGAAAGCAAGATTGGAGTGGTTCGTCCAGCAGAGGATGCTTTTGCTGCAGAAGCAGTTGAAGATTTGAAAGCTGGGAAGGTTATTGCTGTACCCACTGATACACTTTATGGGTTTGCTTGTGATGCTTGCTCGTTGGAAGCAGTTAACCGAATTTATGAGATTAAAGGACGTAAACACACAAGCCCCTTGGCAATTTGTGTTGGGGATGTGTCGGACATAGAGCGTTTTGCAGTGACTGACTATTTGCCTGACGGTCTGCTTGATTCCCTCCTTCCAGGTCCTGTTGCTGTTGTGCTGAATCGAGGAGAATCAAGCATTCTTGAACGATCTTTGAACCCAGGACTTCATAGCATAGGGGTTAGAGTGCCTGACAGCAATTTCATTCGGGTCATTGCTCGTGGCTCAGGAACTGCCTTGGCCCTCACCAGTGCAAACCTAAGTGGACAATCAAGTAGTGTTTGCATCAAGGATTTTGAGGACCTCTGGCGACATTTTGCCTATGTCTATGATGGTGGTTTGCTTCCATCAGGACGTGCAGGTTCCACTATTGCGGACCTCACCGTTCCATCCAAGTACAAGATACTCAGACCTGGAAGTGCAAAGGAAGAGACAGTGGCCATATTGGAGAAGCATTCTCTGGTTGAAGTAAATGAGCAGTGA 867 0.4671 MNIATRIASQALPLLCNRPVPTFSFLENCNCTLGIRKLGFVPQLKQSGRLNRNLPINMAWSVENSDVRVESKIGVVRPAEDAFAAEAVEDLKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDIERFAVTDYLPDGLLDSLLPGPVAVVLNRGESSILERSLNPGLHSIGVRVPDSNFIRVIARGSGTALALTSANLSGQSSSVCIKDFEDLWRHFAYVYDGGLLPSGRAGSTIADLTVPSKYKILRPGSAKEETVAILEKHSLVEVNEQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1317 288 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 84 274 IPR006070 GO:0003725
Lele31g1317 288 Gene3D DHBP synthase 72 280 - -
Lele31g1317 288 PANTHER SUA5 71 280 - -
Lele31g1317 288 Pfam Telomere recombination 91 267 IPR006070 GO:0003725
Lele31g1317 288 SUPERFAMILY YrdC/RibB 84 273 IPR017945 -
Lele31g1317 288 ProSiteProfiles YrdC-like domain profile. 81 269 IPR006070 GO:0003725
Lele31g1317 288 FunFam YrdC N6-threonylcarbamoyltransferase domain containing 75 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1317 Lele-ChrLele31 19211326 19213654 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0232 29 1349925 1352281 Lele31g1317 31 19211326 19213654 hybridization
Lele30g1176 30 14636651 14638747 Lele31g1317 31 19211326 19213654 hybridization