Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1313 ATGCGATTGATCTGTTGGAAACAGTTACCTCTACTTATAGTGATTCAACTTCTATATCCCAACAAATCCAGCTACAAATCATATGCTGAAGCTTTGTTCACTTTCAAGATTACCCTTGGCAGTTCACAGCAAAGTTCATGTAGTATTGCAAAATATCCATGTCAAAGGCAAAGGGCTTGTCTTCATTTCCATGAACTAAAAGACCCAGGTGCTTTTCCTTTGTATAACGCGATAACAGCAAAGATAGACGGGACAAATGAAGTTCCAACACTTACACCTTTACAAGAAGCTCAAGTTAAAAGACCTGGAGGAACTAGGGTTGCTGCCATTGTTGGTGGTGTTGCTGCTGCTTTAGTTGTGATTGTCATAGTAGTAATTGTTTACGCCTGTTTGATGCGTGTTAAGAGGTTTATAAGGCAAACATCTGAAACTGCTTCTTCTTCTCCAACTCCAACTGTTGAATTGAGAATAGCCAGCGCCTCACAGGACATAAGGCAGTTCACAATCATGGAACTTGAACAAGCCACGAGAAATTTCAGTGAAAGTAACCTTGTAGGTGAAGGTAGATTTGGTTTGGTTTACAAGGGTTTACTTCAAGATGGATCTATTGTTGCCATAAAAAGGCGCCAATATGCTTTGACTCACAGTTTCATCCCTAAGGTGATGCAAATAGCTAACATTCACCACATTCATCTTGTCAAGCTTAAAGGTTATTATGAAGATGGCTATCAACAGTTACTTGTGCATGAATATCTTCCTAATGGAAATGTAGGAAATCACCTATATGATAATGAAGGTTTACCGATTGGAAGGTTAGATATGCAGCGAAGATTATCTACAGCTTTGGGTGCTTCCAAAGGATTGGAACATCTTCACCGCTTGGTTCCTCCTTTGGTGCACACAAATTTCAGAACTAGCAATGTTCTTGTGGATGAAAGCTTCACTGCCAAGGTTTCTGATTATGGACTCTGCAAGCTGCTAATAACTAATTCTGACCATGCTGCCTCATCCTCAAACACAGATTGCTTTCGTGACCCAGAGTTTAACCAATCGAAAGATTTCTCAAAGAAGAGTGATGTATACAGTTTTGGGGTCTTCTTACTTGAATTGATTAGTGGACGAGAAGTGCATAACAGAAGCCTCTCAAACTCGCAAGAGAATCTGGTATTTCAGGTTAAGAACAGCCATGGCGTTTTGGAGGAGTTTGTGGACACAACACTAGGAAACAGAAGCCATGAAAAGCAAGCTGCGAAGAAGGTGATGAAGTTGGCGATGATGTGTTTAAACGAGAGCATTGCATTAAGACCATCAATGGGACAAATTGTAGGAGAGGTGGAGCAGATTCAAAGAGAATTTATTAGTGCTTTGCATTCTTACACCAGTGAGGAGATTGGTGGGGTCACTCTTGGGAGTGATCTCTTCAAGTAA 1428 0.4062 MRLICWKQLPLLIVIQLLYPNKSSYKSYAEALFTFKITLGSSQQSSCSIAKYPCQRQRACLHFHELKDPGAFPLYNAITAKIDGTNEVPTLTPLQEAQVKRPGGTRVAAIVGGVAAALVVIVIVVIVYACLMRVKRFIRQTSETASSSPTPTVELRIASASQDIRQFTIMELEQATRNFSESNLVGEGRFGLVYKGLLQDGSIVAIKRRQYALTHSFIPKVMQIANIHHIHLVKLKGYYEDGYQQLLVHEYLPNGNVGNHLYDNEGLPIGRLDMQRRLSTALGASKGLEHLHRLVPPLVHTNFRTSNVLVDESFTAKVSDYGLCKLLITNSDHAASSSNTDCFRDPEFNQSKDFSKKSDVYSFGVFLLELISGREVHNRSLSNSQENLVFQVKNSHGVLEEFVDTTLGNRSHEKQAAKKVMKLAMMCLNESIALRPSMGQIVGEVEQIQREFISALHSYTSEEIGGVTLGSDLFK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1313 475 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 116 448 - -
Lele31g1313 475 Pfam Protein tyrosine and serine/threonine kinase 183 443 IPR001245 GO:0004672|GO:0006468
Lele31g1313 475 Gene3D Phosphorylase Kinase; domain 1 140 251 - -
Lele31g1313 475 Gene3D Transferase(Phosphotransferase) domain 1 252 462 - -
Lele31g1313 475 SUPERFAMILY Protein kinase-like (PK-like) 162 451 IPR011009 -
Lele31g1313 475 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Lele31g1313 475 ProSiteProfiles Protein kinase domain profile. 179 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1313 Lele-ChrLele31 19191416 19193966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1313 167 442 Glycoside Hydrolase AT3G07070 39.583 2.11e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele31g1313 PK_Tyr_Ser-Thr 5.7e-34 CL0016