Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1303 ATGTATATACAGAAATCATTTTGGTGTTTTGGAAAGATGGCGATGGCTGTGGCTCCCCAGAGAGAAAGCAGCAGCGGGAGCATTGGCAAGCACCTTGATTCCGGCAAGTATGTGCGATATACGGCGGAGCAGGTTGAAACGCTCGAACGCGTTTACGCGGAGTGCCCAAAGCCCAGCTCCTTGCGCAGGCAACAACTGATCCGAGAATGCCCTATTCTTGCCAACATCGAACCGAAGCAGATCAAAGTTTGGTTCCAAAATCGCAGGTGTAGAGAGAAGCAGAGAAAGGAGTCAGGGCAGCTTCAAACTGTGAACAGGAAACTGTCCGCGATGAACAAGTTGTTGATGGAGGAAAATGAGCGGTTGCAAAAGCAGGTCTCCCAACTAGTATGCGAAAATGGGTTCATGAGGCAGCAATTGCATAGTGCGTCAGCAGCAACTACTGATGCAAGCTGTGATTCGGTGGTCACCACACCTCAACACTCCTTGAGAGATGCCAATAACCCTGCTGGACTCATATCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACGGGAACTGCTGTTGAATGGGTCCAGATGCCTGGGATGAAGTGGAGTGGCGGCTCGAGCTTGTGGTCTTATTGTGGAGATCCTAAAAGATCGTCCATCTTGGTTTCGGGACTGTCGGAGTCTAGAGTTTTTACAAAGTTCCCTGCTGGAAATGGTGGCACAATTGAACTCGTGTACACACAGACATATGCCCTAACTACGTTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAAGTTTGGACGATGGAAGCCTTGTGAGATCACTGTCTGGTTCAGGTGCTGGCCCTAACGCAGCAGCTGCTGCTCAGTTTGTTAGAGCTGAAATGCTCCCATGTGGCTACCAGATTCGACCATGTGAAGGTGGAGGATCAATCATTCACATTGTAGATCACTTAAATCTCGAGGCATGGAGTGTGCCTGAGGTGCTGAGACCACTTTATGAATCATCGAAAGTGGTTGTTCAAAAAATGACAATTGCAGTAGCTCACGAAACAAGTGGCGAAGTTGTTTATGGTTTAGGTAGGCAGCCTGCTGTTCTGCGAACATTCAGCCAAAGGCTGAGCAGAGGCTTCAATGACGCTGTCAATGGATTTAATGATGATGGCTGGTCCATAATGGACTGCGATGGTGCTGAGGACGTGATTATTGCAGTCAACTCAACCAAGAATCTGAGGTCCACTTCTAATCCTGCAAGTTCCCTAACATTCCTTGGAGGAGTTCTCTGCGCGAGAGCTTCCATGCTGCTCCAGAATGTTCCTCCAGCAGTTTTTGTTCGGTTTCTGAGGGAGCACCGCTCTGAGTGGGCCGATTTCAATGTTGATGCCTATACTGCTGCATCTCTTAAAGCGGGCTTCTTTGCCTATCCCGGCATGAAGTCAACTAGATTCACGGGAAGTCAAATTATCATGCCTCTTGGCCATACAATTGAACATGAAGAGATGCTTGAAATTGCCCGTCTTGAAGGCCTCCCTCTTGCTCAGGAAGACGGTTTTGCTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAAAATGCTGTTGGGGTATGTTCTGAGCTCGTATTTGCTTCAATTGATGAAATGTTCCCTGATGATGCTCCGTTGTTGCCCTCGGGTTTCCGCATCATCCCATTGGATTCAAAATCAGGCAATAAGAAGGATGCAGTATCTGTAAATCAGACCCTAGAATTGACATCCGGTCTTGAAGGGGGCCCAGCAAGAAATCATGCTGCAGGAGATGCATCATCTTGCCAGAATACCCGGTCTGTGTTGACTATTGCCTTTCAGTTTCCTTTTGAGAGCAGCTTGCAGGAGAACATTGCAATTATGGCACGGCAGTATTTGTGCTCTGTGATTTCATCTGTGCAGAGGATTGCCTTGGCTATATCTCCATCTGGTATAATCCCGCCTGTGGGACCAAAACTCAGTCCTGGCTCTCCTGAAGCAGTCACTCTAGCTAACTGGATATGCCGGAGTTATAGGCAAGTCTGCATATTATCTGATAATCAATTATTGAGATCAGATGCTCTTGTCGGTGATTCGTTGCTGAAACATTTATGGAATCATCAGGATGTCATTTTGTGTTGTTCAGTGAGGTCTGTGCCTGTGTTCATCTTTGTAAACCAGGTGGGGCTTGACATGCTGGAAACAACTCTAGTAGCTTTGCGAGATATCACATTAGATAAAATATTTGACGACTCAGGACGCGAGGCATTGTGTACAGAATTCGCCAAGTTGATGCAGGAGGGGTTCGCTTATCTGCCTGCCGGAATTTGCATGTCCATGATGGGACGGCATGTTTCGTATGAACAAGCTGTCGCGTGGAAAGTTCTTGCTGAAGATAACAGCATTTTGAGCGCTGCAAATGAGCCGTCACATACATTTCTCTGTAGGCCATGCTTCTTGTCTAGGCGTGTTAAGATTGATTACTCGTCTTGA 2517 0.4732 MYIQKSFWCFGKMAMAVAPQRESSSGSIGKHLDSGKYVRYTAEQVETLERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKESGQLQTVNRKLSAMNKLLMEENERLQKQVSQLVCENGFMRQQLHSASAATTDASCDSVVTTPQHSLRDANNPAGLISIAEETLAEFLSKATGTAVEWVQMPGMKWSGGSSLWSYCGDPKRSSILVSGLSESRVFTKFPAGNGGTIELVYTQTYALTTLAPARDFWTLRYTTSLDDGSLVRSLSGSGAGPNAAAAAQFVRAEMLPCGYQIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVVQKMTIAVAHETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSIMDCDGAEDVIIAVNSTKNLRSTSNPASSLTFLGGVLCARASMLLQNVPPAVFVRFLREHRSEWADFNVDAYTAASLKAGFFAYPGMKSTRFTGSQIIMPLGHTIEHEEMLEIARLEGLPLAQEDGFASRDIHLLQICSGIDENAVGVCSELVFASIDEMFPDDAPLLPSGFRIIPLDSKSGNKKDAVSVNQTLELTSGLEGGPARNHAAGDASSCQNTRSVLTIAFQFPFESSLQENIAIMARQYLCSVISSVQRIALAISPSGIIPPVGPKLSPGSPEAVTLANWICRSYRQVCILSDNQLLRSDALVGDSLLKHLWNHQDVILCCSVRSVPVFIFVNQVGLDMLETTLVALRDITLDKIFDDSGREALCTEFAKLMQEGFAYLPAGICMSMMGRHVSYEQAVAWKVLAEDNSILSAANEPSHTFLCRPCFLSRRVKIDYSS 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1303 838 SMART START_1 174 358 IPR002913 GO:0008289
Lele31g1303 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 229 809 IPR044830 GO:0003700
Lele31g1303 838 SMART HOX_1 33 99 IPR001356 GO:0003677
Lele31g1303 838 Gene3D - 30 102 - -
Lele31g1303 838 ProSiteProfiles START domain profile. 171 340 IPR002913 GO:0008289
Lele31g1303 838 Coils Coil 101 132 - -
Lele31g1303 838 Gene3D - 204 355 IPR023393 -
Lele31g1303 838 Pfam Homeodomain 36 94 IPR001356 GO:0003677
Lele31g1303 838 FunFam Homeobox-leucine zipper protein REVOLUTA 36 91 - -
Lele31g1303 838 SUPERFAMILY Homeodomain-like 35 98 IPR009057 -
Lele31g1303 838 CDD bZIP 88 127 - -
Lele31g1303 838 Pfam MEKHLA domain 677 811 IPR013978 -
Lele31g1303 838 ProSiteProfiles 'Homeobox' domain profile. 31 95 IPR001356 GO:0003677
Lele31g1303 838 Pfam START domain 238 353 IPR002913 GO:0008289
Lele31g1303 838 CDD homeodomain 36 96 IPR001356 GO:0003677
Lele31g1303 838 SUPERFAMILY Bet v1-like 174 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1303 Lele-ChrLele31 19131159 19138738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1303 13 811 Homeobox Transcription Factor Family AT5G60690 72.110 0.0 1197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele31g1303 MEKHLA 3e-37 CL0183