Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1301 ATGAAGGAAGAGAAAAGCTTGGATCCACAGCTATGGCACGCGTGCGCCGGATGTATGGTTCAGATGCCATCTCTGAACTCCAAAGTCTTCTACTTTCCTCAAGGACACGCCGAGCACGCCCAGGCCGGCGTCGATTTTGCGGCCTCCTTGAGAATTCCACCGCTCATTCTCTGCCGCGTGGCAACCGTGAAATTCCTCGCAGACCCAGAAACCGACGAGGTCTTTGCCAAGATCAAGTTGATTCCTTTGAGAAACTCCGAGCTTGATGACGGCGACTGCGACGAAAACACTCACGGCTCTGAAAATTCGGAGAAGCCCGCATCTTTCGCCAAGACCTTAACCCAGTCCGATGCTAACAATGGCGGAGGCTTCTCTGTTCCGAGATACTGTGCAGAGACCATATTCCCACGTCTCGATTACTCGGCGGAGCCCCCGGTTCAAACCGTGATTGCGAAGGACGTCCACGGGGAAATTTGGAAGTTCAGGCATATCTACAGAGGGACACCTCGCCGTCACTTGCTGACAACAGGGTGGAGTACTTTCGTCAACCAGAAGAAACTCGTAGCAGGGGACTCCGTCGTGTTCCTGAGGGCCGAAAATGGCGATCTCTGTGTGGGGATTCGCCGTGCAAAGCGTGGGATCGGCGTTGGATCCGACGGCATCTCCGGTTGGAGCTCCGGTGCCGGGAACTGTGTGGGGCCTTATGGGGCTCTCAGTGTGTTGTTAAGAGAAGAGAACAAGCTTCTGCGAAGCAATTCGAATGGTGGGAATTCAAATCCTGGGAGAGCAAAAGTGAGACCAGAATGTGTGATGGAAGCTGTGACACTTGCTGCTAGTGGTCAAGCATTCGAGGTTGTTTATTACCCACGAGCAAGCACTCCTGAGTTCTGTGTGAAAGCTGAGGCTGTGAAGGCAGCCATGAGAATCCAATGGTGTTCTGGTATGAGATTCAAGATGGCCTTTGAGACAGAGGATTCTTCCAGGATTAGCTGGTTCATGGGCACTGTTGCTTCTGTTCAAGTTGTTGACCCTATTCGCTGGCCCAATTCTCCTTGGAGACTTCTTCAGGTTACTTGGGATGAACCAGATTTGTTACAGAATGTGAAGAGGGTTAGTCCATGGTTGGTTGAACTGGTATCTAACAGGCCGGTGATCCCTCTCATGCCATTCTCTCCCCCTCGGAAGAAAATGCGGCTTCCTCAACACCCAGACTTCCCCTTTGATGGTCACTTTACGATACCAATCTTCCCCGGCGGCAACCCTCTCGGGCCCAGCAGCCCCTTGTGTTGTCTTTCCGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTCGGAATATCTCTTTCAGATCTCCACCTAAACCATAAGTTGCAGTTGGGGCTGCTTTCGAATAACATTCAGCAGCTTGATGTGCATCCCGGGATTTCTAATGGCAATATAATGATGAGCCATGACAAGAAAAATGAGAGCTTGTCATGCTTGCTTACCATGGGAAATTCTAACAAGAGTTTAGAGAAATCTGATAATGCGAAGAGACACCAGTTTCTGCTTTTTGGACAGCCAATTCTGACCGAGCAACAAATTTCTCAAAGCTGTCATGCTGAAGTGTGGTCTCCGAACTTTTCGCGTAAAAATTCGCCGGATGAATTTAAGGATAAAGCAAAGAGCTTCTTGTGGGGATCCCAATCCGCGGTTTCACAGCCAGGATTAACTTCTACAACCGACTTCTCTTGGCAACTCGGCTTGGATACAGGTCATTGCAAGGTTTTCTTGGAGTCAGAAGACGTGGGGCGCACTCTAGACCTTCCATGTCTCGGCTCTTATGAAGAGCTGTATCGGAAACTGGCCGACATGTTCGGACTTGAAAGATCCGAGATGCTGAGCCGTGTGCTCTACCAAGATGCTTCTGGTGCTGTCAAACGAACTGGAGAAGAACCCTTCTGTGACTTCATGAAAACAGCAAAAAGATTGACAATTCTGACGGATTCGGGCAGCAAAGACATTACGAGGGCGTGGATTACAGGATCTCGAAATGGAGATCATGGACTGGACGCAGCATCAAACAAGACAGGCTTTCTGAGCATATTTGCCTGA 2103 0.5007 MKEEKSLDPQLWHACAGCMVQMPSLNSKVFYFPQGHAEHAQAGVDFAASLRIPPLILCRVATVKFLADPETDEVFAKIKLIPLRNSELDDGDCDENTHGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKRGIGVGSDGISGWSSGAGNCVGPYGALSVLLREENKLLRSNSNGGNSNPGRAKVRPECVMEAVTLAASGQAFEVVYYPRASTPEFCVKAEAVKAAMRIQWCSGMRFKMAFETEDSSRISWFMGTVASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNRPVIPLMPFSPPRKKMRLPQHPDFPFDGHFTIPIFPGGNPLGPSSPLCCLSDNAPAGIQGARHAQFGISLSDLHLNHKLQLGLLSNNIQQLDVHPGISNGNIMMSHDKKNESLSCLLTMGNSNKSLEKSDNAKRHQFLLFGQPILTEQQISQSCHAEVWSPNFSRKNSPDEFKDKAKSFLWGSQSAVSQPGLTSTTDFSWQLGLDTGHCKVFLESEDVGRTLDLPCLGSYEELYRKLADMFGLERSEMLSRVLYQDASGAVKRTGEEPFCDFMKTAKRLTILTDSGSKDITRAWITGSRNGDHGLDAASNKTGFLSIFA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1301 700 SMART B3_2 109 211 IPR003340 GO:0003677
Lele31g1301 700 FunFam Auxin response factor 311 384 - -
Lele31g1301 700 Gene3D - 107 211 IPR015300 -
Lele31g1301 700 ProSiteProfiles PB1 domain profile. 587 667 IPR000270 GO:0005515
Lele31g1301 700 Gene3D - 586 672 - -
Lele31g1301 700 SUPERFAMILY DNA-binding pseudobarrel domain 102 212 IPR015300 -
Lele31g1301 700 Gene3D - 311 383 - -
Lele31g1301 700 FunFam Auxin response factor 107 211 - -
Lele31g1301 700 CDD B3_DNA 108 209 IPR003340 GO:0003677
Lele31g1301 700 ProSiteProfiles B3 DNA-binding domain profile. 109 211 IPR003340 GO:0003677
Lele31g1301 700 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele31g1301 700 Pfam B3 DNA binding domain 109 210 IPR003340 GO:0003677
Lele31g1301 700 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 4 667 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1301 Lele-ChrLele31 19112683 19115589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1301 4 672 B3 DNA Binding Superfamily AT4G30080 60.677 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele31g1301 B3 1.7e-21 CL0405