LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele31g1291	ATGAAGCCCCAGCTCGAAGTTGTTCTCTCTTTTGTAATTTGCATGATCTTGTTTCGTTGCTCACTTTGTGATCAACAATCTGATACTTCTGGCCATAACAAGTGGGAATGTAGATGTTCTTTCCAAGGGAACCAGGACTCTATTGCCAACTGTTCTGCATCCTGTGATTGTCGTTCAGATGCAAAAGAGAGTGGATCTATATGGACATGCATATGTGATCCCAACGGGTTTCCTAAAGTGCAAGAAGATGGCCATAGTCCTAATTGCTTTACAGCCTGCAACTGCACCTGGGGATCTCTCACCATGTCACAAGGTTCAAAGAAACACATATCCAGCAAGATTATAATAATTATTCTTTTAGTATGTGTTTTATGTACAACTATTGCATTTCTAGCCTCGTTCACTTGCTATGTCTGCTGGAAGGACCGATGTCCTATTCAACCGCCAATATTCTCATCAGATAAGGAAACAAGTTGCAATAGTACCACCAACTTAATTAGTAACAGGACTTCATCAGTGTTAGAAACAAAATTTGCCCTAAATTCTCCCATTAATAATATTACAGGGTGCTTTAAGAAGCCCTCTTTCTTGTTTGGGACCAGAACAGAGTCTTGTCAAGGCAAAATTATTCAATTTTCATTTGCCGAATTGGAAAATGCAACTGAAAACTTTTCAGCTTCCAATCTTATTGGACTAGGTGGAAGTAGCTATGTATATCGTGGTCAGCTTAAAGATGGAAGTAATGTGGCAATTAAGCGACTAAAATCTCAAGGAGGGCCTGAAGCCGACTGTGTATTTTTGACAGAGATTGAGCTATTATCTAGACTCCATCATTGCCATCTTGTGCCTTTACTTGGATACTGTTCAGAACTAAAAGGGAAACATGTTGAAAGGCTACTAGTATTTGAGCACATGGCCAATGGCAATTTGAGGGACTGTTTGGATGGAGTTTCTGGAGAAATTATGGATTGGGCTACTCGGGTTACAACTGCAATGGGAACTGCAAGAGGCTTGGAATATCTCCATGAGGCGGCAGCTCCAAGAATTCTGCACAGAGATGTAAAATCAACTAATATTCTTCTGGATGAAAATTGGCAGGCAAAAATAACTGACCTTGGCATGGCTAAAAACTTGAGAGTTGATGAACCCCCAAGCTGCTCAAATTCCCCAGCAAGAATGCAGGGGACGTTTGGCTATTTTGCACCTGAGTATGCAATATTTGGAAGAGCCTCTCCTAAGTCTGATGTCTTCAGTTTTGGCGTGGTTCTTCTTGAGCTCATGAGTGGTCGGCAGCCTATCCACAAATCCGCAGGCAAAGAAGAAAGCCTCGTCATATGGGCTACACCTCGCTTGCAAGATAGTAAGCGAGTGATAACAGAGTTGGCCGATCCACATTTGAATGGAAACTTCCCTGAAGAAGAAGTGCAGATAATGGCATATCTAGCAAAGGAGTGTTTGCTGCTGGACCCTGATGCTAGGCCAACCATGAGTGAAGTTGTTCAAATTCTTTCAACAATATCACCTGCTAAATCTAGGAGGAGAATAAACATTCCAGTGAGCCTTTTTCAGGAACCTCAGGATTCAGAAATTCAAATGCAAGCTCCGTCTTGTGAATCTTCGGGTCAAAATTCATTGCCATTAGGTATTAACCATAATCTGATTGTTGGGAACAAAAGTGAAGAAGTAGAAACAGTTTCATCTGAGTATATGGAGAGTTTGATCCTCTTGACTTCTAAAACAGAGGGTTTGCATGGATCAGAAGATGAAACCGTAGACCTAACTGAGCCTCGGTTCGAATCATTTTGCCTGACAAATAGCAATTCTCCTTGA	1830	0.4148	MKPQLEVVLSFVICMILFRCSLCDQQSDTSGHNKWECRCSFQGNQDSIANCSASCDCRSDAKESGSIWTCICDPNGFPKVQEDGHSPNCFTACNCTWGSLTMSQGSKKHISSKIIIIILLVCVLCTTIAFLASFTCYVCWKDRCPIQPPIFSSDKETSCNSTTNLISNRTSSVLETKFALNSPINNITGCFKKPSFLFGTRTESCQGKIIQFSFAELENATENFSASNLIGLGGSSYVYRGQLKDGSNVAIKRLKSQGGPEADCVFLTEIELLSRLHHCHLVPLLGYCSELKGKHVERLLVFEHMANGNLRDCLDGVSGEIMDWATRVTTAMGTARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRVDEPPSCSNSPARMQGTFGYFAPEYAIFGRASPKSDVFSFGVVLLELMSGRQPIHKSAGKEESLVIWATPRLQDSKRVITELADPHLNGNFPEEEVQIMAYLAKECLLLDPDARPTMSEVVQILSTISPAKSRRRINIPVSLFQEPQDSEIQMQAPSCESSGQNSLPLGINHNLIVGNKSEEVETVSSEYMESLILLTSKTEGLHGSEDETVDLTEPRFESFCLTNSNSP	609

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele31g1291	609	PANTHER	OS01G0750732 PROTEIN	27	525	-	-
	Lele31g1291	609	FunFam	receptor-like serine/threonine-protein kinase NCRK	305	515	-	-
	Lele31g1291	609	Gene3D	Transferase(Phosphotransferase) domain 1	305	520	-	-
	Lele31g1291	609	ProSitePatterns	Protein kinases ATP-binding region signature.	230	252	IPR017441	GO:0005524
	Lele31g1291	609	ProSiteProfiles	Protein kinase domain profile.	224	506	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele31g1291	609	Gene3D	Phosphorylase Kinase; domain 1	199	304	-	-
	Lele31g1291	609	SMART	serkin_6	224	506	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele31g1291	609	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	349	361	IPR008271	GO:0004672\|GO:0006468
	Lele31g1291	609	FunFam	receptor-like serine/threonine-protein kinase NCRK	198	304	-	-
	Lele31g1291	609	Pfam	Protein kinase domain	226	501	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele31g1291	609	SUPERFAMILY	Protein kinase-like (PK-like)	207	503	IPR011009	-
	Lele31g1291	609	CDD	STKc_IRAK	230	503	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele31g1291	Lele-ChrLele31	19037848	19041359	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele31g1291	1	605	Receptor kinase-like Gene Family	AT2G28250	53.758	0.0	583

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XVI	Lele31g1291		Pkinase	4.1e-43	CL0016