Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1287 ATGCACGGGAAGCCGGAGTTTACAGACCATTTGGCACACAGATTAAAACATCATCCTGCGCAGATCGAAGCAGCAGCAATCATGGAACACATCTTAGATGGAAGTGCTTATGTTAAAGCTGCGAAAAAGTTGCATGAGATTGATCCTTTCCAAAAGCCTAAGCAAGATAGGTATGCTCTTAGAACTTCACCTCAATGGCTAGGTCCTCAGATAGAAGTTATCAGGTCATCAACAAAATCCATTGAGAGGGAGATCAACTCTGTCAATGATAACCCTTTGATTGATGTATCGAGGAACAAAGCTCTTCATGGTGGCAATTTTCAGGGCACCCCAGTTGGTGTTTCCATGGACAACACAAGACTAGCTTTGGCCGCCATTGGAAAGCTCCTTTTTGCTCAAATGTCTGAGCTTGTTAATGATTTTTACAACAATGGCTTGCCATCAAATCTTTCTGGGGGACGTTTTCCAAGCTTGGATTATGGATTCAAGGGTAGTGAAATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTATCTGGGAAACCCAGTCACTAATCACGTCCAAAGTGCAGAACAGCACAATCAAGATGTGAACTCATTAGGATTAATCTCTGCAAGGAAAACAGCTCAAGCAGTTGAGATATTGAAGCTCATGACTTCAACCTACTTGATCGCTCTCTGTCAGGCCATAGATTTGAGGCATTTGGAGGAGAACTTGAAGAACACGGTTAAGAATACAGTGAGCCAAGTGGCTAAGAAGGTCCTAACCGTGGGTGCTAATGGAGAGCTTCGTCCTTCAAGATTCTGTGAGAAAGATTTGCTCAAGGCGGTTGATCGGGAACATGTTTTCGGATATATTGATGATCCCTGTAATTCTACTTACCCTCTGATGGAAAAGCTAAGGCGTGTAATTGTGGAACACGCATTGATGATGAATAATGATGGTTTGGAAAATGGATATGCTTCAATATTCCTCAAGACCCTTGCCTTTGAAGAGGAACTGAAAGCAGTGTTGCCCAATGAAATTGAATCTGCAAGAAATGCCTTTGAGAAGGGCATTTCAGCAATCCCTAACAAGATTAAAGATTGCAGGTCCTATCCACTTTACAAGTTTGTAAGGGAGGAGTTGGGAACACAGTTTTTAACCGGAAACAAAAGTCGGTCCCCAGGAGAAGATTTTGATAAATTTTTCACTGCAATTAGTGAAGGGAAGTTGATTGATCCAATGTTTGAATGCTTAAAGGACTGGGATGGTGCACCTCTTCCAATATGCTAA 1275 0.4212 MHGKPEFTDHLAHRLKHHPAQIEAAAIMEHILDGSAYVKAAKKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRFPSLDYGFKGSEIAMASYCSELQYLGNPVTNHVQSAEQHNQDVNSLGLISARKTAQAVEILKLMTSTYLIALCQAIDLRHLEENLKNTVKNTVSQVAKKVLTVGANGELRPSRFCEKDLLKAVDREHVFGYIDDPCNSTYPLMEKLRRVIVEHALMMNNDGLENGYASIFLKTLAFEEELKAVLPNEIESARNAFEKGISAIPNKIKDCRSYPLYKFVREELGTQFLTGNKSRSPGEDFDKFFTAISEGKLIDPMFECLKDWDGAPLPIC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1287 424 Pfam Aromatic amino acid lyase 1 246 IPR001106 -
Lele31g1287 424 CDD PAL-HAL 1 233 IPR001106 -
Lele31g1287 424 Gene3D Fumarase/aspartase (Central domain) 1 418 - -
Lele31g1287 424 PANTHER HISTIDINE AMMONIA-LYASE 1 424 IPR001106 -
Lele31g1287 424 Gene3D - 236 358 IPR023144 -
Lele31g1287 424 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 1 414 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lele31g1287 424 FunFam Phenylalanine ammonia-lyase 236 358 - -
Lele31g1287 424 SUPERFAMILY L-aspartase-like 1 424 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1287 Lele-ChrLele31 19009498 19010772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1287 1 424 Monolignol Biosynthesis Gene Families AT2G37040 79.481 0.0 733