Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1286 ATGCAGTGCATTGTCAAGATTTCCCTTGAAAATGCCGAAGTTCTCTTGCATTTTGCTTCTGTGACTTACAGCGGGATCGTAACCACATTGTATTTCTGCCATCTTCATTTTTGTGAAATGTACCCGGATCGTGAAGCATTATTGATTTATGTAGAATACACGATGGATTTACTGTGGGATGGTGACCAATGTTTAAACTTTGATTTTAGATTGGATTACAGGAAACACTGTCTACCATTTGGGATTAGTATAAGTGCTTGTCCTGAGGAGACAAATGGTAAAGATAATTTAATTCAAGAAGGTGGCAACAACGTTGAGGACAAGATTGATGAGCACATCAAAGGGAGTAATTTAGATTGTAAAGAAGTTTCCAACAACAAAATGCCACCATCTGATGATACCAAGGAGTTAGCTAACCTTTCTGATGTTGAGGATAGAGGTGAAACTGAAGCCACCTTCACCACAGAAATTTCGGAGAAAGGCGTTGACTGCGCACCTTCAAATGATTTATCTGCAGAGATCCCAGCAGATGAAGGAAAAATATGTCTCATTTGCAAATGTGGTGGGCGGCTCTTATTCTGTGATGGAAAAAAATGCGATGGATGCTACCATTTTTCTTGTCTTGAACCTCCCATGGCGGATGCTCCCCTTGGAGTTTGGCACTGTCACCTCTGCTTGAAGAAGAAGATAGAGTTAGGTGTATATTCTGTGTCTGAGGGAGTAGAATCAATTTGGGATGCCCGAGAAGTCAAGTTGTCTCATGCTGATGGATGGACAACTGAGAAACATTTTCTTGTGAAGTATAAAGGCCTTGCTCATGTCCACAACCGTTGGGTCCCAGAAAGTCAGTTACTTCTAGAAGCTCCTCCATCGCTGCTTGAGAAATTTTATCAGAAAGATCAGGTCTTAAATTTCTTAGCTCTTTTTTTGAAGTTCATGTTAGGTAAACCGGCCTTAAAGTGCAAGCAAGTATGGAGGTTACCTCATCGCTTGCTTCAGAAGAGAGAATTAATCTTTGCCCAGCAGGATGGTGATCCCAAGAATGGCCAAGCTGTTGGTAATTCTGACTGTTATTATGAATGGCTTGTTAAATGGCATGGTCTTGGTTATGAACACGCATCATGGGAGCTGGACAATGCTTCATTTCTTCGTTCGCTTGAAGGTCAGAAGCTAATTAAAGACTATGAAGATTGTCATCAGAGGGCGAAGAGAGTTCCTTTATCATCCAAAGCAGATAAGAACCTAGTCCGCATTAGTTCTTTTAGCAAATTATCTCAGACGCCTGGTGGATTTCCTCCTGGATTTGATATGAGCAATTTGGATGCAGTTAACAAGCTACTTGAGCACTGGCACAAGGGTCAGAATGCTGTTGTATTTGATGACCATGACAGAATGATCAAAATGGTTGCATTTATCTTATCTTTGGACTCTAATACTTGTCGACCTTTTCTCATTATCTCAACTTCTGCTGCTCTCCATTTATGGGAGGATGAGTTTTCTTGTTGGGCGCCATCTCTCAATGTTATTATTTACGGTGGAAACAAAGAGATTCGTAGAAGCATTAGGAAACTAGAATTTTATGAGGAAGGGGGCTGTCTGCTTTTCCAAGTACTGATAGTACTTCCTGAGATCATCATTGAGGATCTAGAGGTTTTAGAAGGCATAGAATTTGAAGCAATCATAGTTGATGAGGGCCAGGGCTCAAAGATCTCAACTTATTTGAAGCAAATTAAAATGTTAAAGACAGATTTGTGGATTCTTCTTCTCAGTGGCCAACTAAAGGATAGTGTTGAAGAATATCACGATGTCCTGGCTTTTCTTGATCATCAGAGTTACAATGAGGATAATGATGATTTAATCTCCAATTCTAGTGATATTGGTCAACTAAAGGATAAGCTATCAAGTTTTGTTGCATATAGATGCAAATCAGACTTCTTTAGGTTTGTTGAGTATTGGGTTCCTGTGAACATATCCAATGTGCAACTTGAGCAGTATTGTGCTGCTTTACTTTCAAACTCTTCAATATTACGCTCGCAATCGAAATCTCATGTTGTTGGTGCCCTTCATGACATTCTTATTACTACCCGGAAGTGTTGTAATCACCCCTATCTTGTTGATGAATCCCTACAAAGTTTCCTTATCAAAGATCTTCCACCTGCTGAGATCCTGGATGTTGGAATAAAAGCAAGTGGGAAGCTGCAACTTCTTGATTCCATGCTCATGGAATTGAAAAAACAAGGTCTTAGGGTGCTTATTCTTTTCCAGTTTTTAGGTGGTTCTGGGAAGGTTTCGATTGGAGATATTTTGGATGACTTAATACGTCAAAGATTTGGTCCAGATTCTTATGAAAGAATTGACAAAGGTGTTATGAATTCTAAGAAGCAAAGTGCTCTGAAAATGTTTAATAACAAGGACCATGGGAGATTTGTATTTTTATTAGAGACAAATGCTTGCCATCAAAGCATCAAATTGTCATCAGTTGATACCATTATCATATTTGATAGTGATTGGAACCCATTGAATGATATAAGATCCCTTCAGAAAATAACACTTGATTCACAGTTGGAACAGATTAAAATATTTCGGTTATATTCATCTTTCACTGTTGAAGAAAGAGCCCTAGTCCTTGCTAAGCAGGATAGACCACTTGATAGCAGATTAGACATAAGTTGGAGTGCCAGTCACACACTGTTGATGTGGGGTGCATCGTCTTTATTTGATGATTTAAAAGATTTTCATGATTGTAAAAATGATACCTTAAGTGTGAATTCCTTATCTGGAGAATCATCTTTAGAACACGCTCTACATGAATTCTCATCCATACTTAAGCAAAATGGTGAAGATAATGACGCAAGGGACTGCTCATTTCTATTGAAAGTAAAGCAAAATGGATTGAAATACCACCCAAATTTTTCCTTGCTTGGTGAGCTGAAATTCAAGTCACTGGATTCAGAGCCATGCCACTTATTTTGGACTAAAGTTTTAGAGGTAAAAAATCCACGATGGAAATACTCATGTGGTTCATCTCAAAGGAGCCGAAAGAGGGTTCAGGTTTTTGATGGTTCAGGAAATAAGCCTGACCTTGAGAATGAAGAGGTAGTGAAAAAGCGTGCAAAACTGACATTTAATGCTGATCAGCCTTATTTAAAACGTGAAGGTGAAAAATTATCTGCTGGAAACAAGGAAGGAAATTCTGGAGAATCAATGGAAAGACCTCAAGGCAATGATGTTGAATTCCTGAAAGCAAGGAAATCGCGTGATGAGCAAAGGAGCTCACATCTTTCTCTGAAGTCAGAATTAGCTAAGCTTTGTGAAATCCTTCATGTCCCAGATAATGTCAAGAGGATGGCTGATGAATTTCTTGAGTATGTCATGAACAACCACCGTGTGGATAGTAGTACTCTTCCAAAGTCAATATTGGAGGCTTTTCAAATTTCTCTGTGTTGGATTGCAGCTGCTTTGGTAAAGCACAAGATTGACCATGAAGCTTCCCTTATGCTCGCAAAACAGCATTTAAAATTTGATTGTTGGAAGGATGAGGCAAACGTAATTTATTCAATGTTGCAGTGTCTGAAGAACTTATTTTTGCATCGAACAGGAAATTACAATGTCACTGGCTCTCCAAAAGCTTCTGCATCCGAAGCATCTGGTAAGAATTATTCCTGTACGGGCCTGGCTCTAGAGGTTGAGTTAGCTGAGAAAGATGTGTTGGAAAGCATTAAAGACATTCGAAAGAAGTGCCAAAAGACGCTGAGGAAGTTACTTCTAAAGCATCAAGAAGAAAAGTACAAGCTGGATGCAACATATGAGGAAAAAAAGGCCCATCTTGAGAGAGAATACAAAATAGAATCAGCCGTTATTCGGTCCTGTGCTCCCAATGATGTGATGAGATCAGAAAACCTTAAGGATTTAGATATCGAATATATAGGAAGAATTGAAGATTTGAAGCATCAGCATGAAATGTATCTCAAAGATCTTGAGAATGCCCAATCAATAGCAAGGCGAATGTTACAAAATAGGGAGGCCAGTTGGGTGGAAGATGTGAAGTCTTGGGCGCAAGATCAATTGTTAAACACACTTCCCTCGAAAGAACATGGGAATGGGATAGAATACTTGAAGACTAGTGAGCAAGCTGAGCCTGATAATGATCCAAAGAATGGAGACCTTGTATCCAATCTTGTTATTGAAGGTACAAATTTCGATAGAATAGTTGAAGCCATGACAGGGACTGGGGTTGGATCATCTAGAACTCCTGAAATCGTGTCCCCTGTAGCTGTACAATGCGGTAATCCGGTTGAAGGGCAAACTCCTCCAGTTGAGGTTGCTAGTGCCTATGAGGGCCATGATGGGGCTCAAAATGTATGTGATAGTCAAGGGGAAATGATCTCTGTGCATTCCCATTCCAAAGGACATAATGTCAACGGAGCCACGTGCATGATTAATGAAGGGGAAGGACATAATATTTTTTATGATGGTTATAGGGAGAAAACTGTGCCTGATGGTTTAGAGAAGGATATAACTGTGGATCCTCCTCCATCCAGGGAACTAATTTCTGATGGAAGTCCATTGAATGTTTCAGATAGAGAGTTATCATCAAGACAATGTGAAAGTCCACTCTTGCCAGATCAGCAAACTTCTGATGGAGTCTCATTACACATGCAAAATGGACAGGTTCCAATTGAAGTGCCTGAAACTAGTCGTGGAATAGTTGAATGCTATAATGGCAGAGAGCACCAAACAGATGCGGTATTGTTGGATCAAATTGCCACATCAGAGGAGCAGGAACAAATGTCGAGAACCATGAGCCATAACACGTCCCAGGTACTACAAGATTCGCATGCCTCTTTATTAACATCGCCCAGAATGGTTGATAAAGCTGCCACAGTGGGAGAAATACCTAACTCTTCCAGACCAGTTGAACAGGCTTCTTGTCCAGTTGATGCTACTCCTGCTGATCAATCTAATCCCGAATCAGTCATGGAGCCTCAAGAGCAGATGCAGCAATTACCATTTGTAGAGTCCCTTGCTTCCAACCAGGATACAGCTGGAGAAATGCAGATCTCCACTCAGCAAGTTGAGGCAGCGTCTAGTCCTGTTGATGGTTTACCAGCTGGTCAATTTAATGATGACCCAGTCAGGCAGCCTCTAGAGCAACTACAACAATTACCTTCTACAGAGCCCCTTGCTTCTAACCCGGACACTTCTGGAGAGTTGCTCAACACTTCCCAGCAAGTTGAGGCAGTATGTCGTCAAGTTGATGTGGCACAAACTAATGGGTTGAATCCTGAGTCACTGGTCAGGGAGCTTCTACAGCAGATGCCGCGACTTCCAACTGCAGAGCCCATGAATTCCTCCCATGATCGATCTATGGCACTTGAAATTCGGTCAAATAATGAAGATCCTCTGTATGGTCATGTTCCCCCTGCACCAATGGAGGTTACAAATCAGGCTATTGTTCATCCTTCCTCAAATTCTGAACCTGATTCACATGCACCTGTTGGTGCATTCAGAACGCAATCATTAGGCACAAGAAATGTGTTCACTCCTTCAGAGATCAATAATCATCTTAGACAAACTGCAACCCAATCAATGAACAGGATGCATTCACCTTTGGTCAACGATCCATTAAAGAATGAATTGGACAGATTACATAAAGAATCAGAGCAAACCATGAAATACTACGAACATGTGAAATTGCAGCTGAAATCTGATTGTGAGAGAGAAATTGAGGAAATTCGCAGGAAGTATGATGTCAAGTTACAAGAGAGTGAGCTTGAGTTTCAACAGAAAAAGAAAAACCTGGATACAAATCTCAACTTAGTTCAGATGAATAAGATGTGGGCAGAGGCTTTTAGGTCTAAGTGCATGGATCTTAGAGCATCTGGGGCACCAGGAATGCAGCAAGATCTAGGTTTGGCACAGCAATTGGCTTGGCTTTCACGACAGCAAAGAGATATGAGGTCTTCCCTTATTGCAAGTCCACCTCTTGGGCCTCCTGCATCTACCCCGCAGCATTTTGCCACTGCTGCTAGCTCTCAGGCCATGGCGCCACCTCACGTATCCAGTATGCCAATTTTTATGACACCTATGCCTGCTGCGGCTAGCTCTTTACCCATGGCGCCACCTATATCCTCTACAACGGGCTCACAGACCATGGCGCTGCCTCTACTGGCTGCTTACACTGCACCTCCAAGGCCACCCCATATCAACTCCATTTCTCCATTGGCAAATCATCAAGCTGGTAGTGGGTTCCGTACCACTCCACCACATCTCCAGCATTATAGACCCTCAACATCTTTGCCTGATTGGAGTCAACAAGCTCCTAATAACATTCCTGTAATGCCCTCGTTACCTAACCGTCCTCGACCAACACTTCCAACCAATATATCTGATCCTCATAATAGAGTTCACCGGCCTGAAATTCCTGTACTGTTACCCAATCCTAGCTTGTCAGCCAGGGAGCCAGCTATGGATGGTAATTGTCAACTGGGTATGAATCTGGCAAATACTCTGTTACGTTCCTCGAATGCGACATCGTTGCAGCAATCTGAGTTTGGCACCGCTACTAGAGTGCAAGATGACTCTGTTCGTCCAGCCATGTTGCACGACATAGTCTGTTTGTCAGATGATGACTAA 6636 0.4156 MQCIVKISLENAEVLLHFASVTYSGIVTTLYFCHLHFCEMYPDREALLIYVEYTMDLLWDGDQCLNFDFRLDYRKHCLPFGISISACPEETNGKDNLIQEGGNNVEDKIDEHIKGSNLDCKEVSNNKMPPSDDTKELANLSDVEDRGETEATFTTEISEKGVDCAPSNDLSAEIPADEGKICLICKCGGRLLFCDGKKCDGCYHFSCLEPPMADAPLGVWHCHLCLKKKIELGVYSVSEGVESIWDAREVKLSHADGWTTEKHFLVKYKGLAHVHNRWVPESQLLLEAPPSLLEKFYQKDQVLNFLALFLKFMLGKPALKCKQVWRLPHRLLQKRELIFAQQDGDPKNGQAVGNSDCYYEWLVKWHGLGYEHASWELDNASFLRSLEGQKLIKDYEDCHQRAKRVPLSSKADKNLVRISSFSKLSQTPGGFPPGFDMSNLDAVNKLLEHWHKGQNAVVFDDHDRMIKMVAFILSLDSNTCRPFLIISTSAALHLWEDEFSCWAPSLNVIIYGGNKEIRRSIRKLEFYEEGGCLLFQVLIVLPEIIIEDLEVLEGIEFEAIIVDEGQGSKISTYLKQIKMLKTDLWILLLSGQLKDSVEEYHDVLAFLDHQSYNEDNDDLISNSSDIGQLKDKLSSFVAYRCKSDFFRFVEYWVPVNISNVQLEQYCAALLSNSSILRSQSKSHVVGALHDILITTRKCCNHPYLVDESLQSFLIKDLPPAEILDVGIKASGKLQLLDSMLMELKKQGLRVLILFQFLGGSGKVSIGDILDDLIRQRFGPDSYERIDKGVMNSKKQSALKMFNNKDHGRFVFLLETNACHQSIKLSSVDTIIIFDSDWNPLNDIRSLQKITLDSQLEQIKIFRLYSSFTVEERALVLAKQDRPLDSRLDISWSASHTLLMWGASSLFDDLKDFHDCKNDTLSVNSLSGESSLEHALHEFSSILKQNGEDNDARDCSFLLKVKQNGLKYHPNFSLLGELKFKSLDSEPCHLFWTKVLEVKNPRWKYSCGSSQRSRKRVQVFDGSGNKPDLENEEVVKKRAKLTFNADQPYLKREGEKLSAGNKEGNSGESMERPQGNDVEFLKARKSRDEQRSSHLSLKSELAKLCEILHVPDNVKRMADEFLEYVMNNHRVDSSTLPKSILEAFQISLCWIAAALVKHKIDHEASLMLAKQHLKFDCWKDEANVIYSMLQCLKNLFLHRTGNYNVTGSPKASASEASGKNYSCTGLALEVELAEKDVLESIKDIRKKCQKTLRKLLLKHQEEKYKLDATYEEKKAHLEREYKIESAVIRSCAPNDVMRSENLKDLDIEYIGRIEDLKHQHEMYLKDLENAQSIARRMLQNREASWVEDVKSWAQDQLLNTLPSKEHGNGIEYLKTSEQAEPDNDPKNGDLVSNLVIEGTNFDRIVEAMTGTGVGSSRTPEIVSPVAVQCGNPVEGQTPPVEVASAYEGHDGAQNVCDSQGEMISVHSHSKGHNVNGATCMINEGEGHNIFYDGYREKTVPDGLEKDITVDPPPSRELISDGSPLNVSDRELSSRQCESPLLPDQQTSDGVSLHMQNGQVPIEVPETSRGIVECYNGREHQTDAVLLDQIATSEEQEQMSRTMSHNTSQVLQDSHASLLTSPRMVDKAATVGEIPNSSRPVEQASCPVDATPADQSNPESVMEPQEQMQQLPFVESLASNQDTAGEMQISTQQVEAASSPVDGLPAGQFNDDPVRQPLEQLQQLPSTEPLASNPDTSGELLNTSQQVEAVCRQVDVAQTNGLNPESLVRELLQQMPRLPTAEPMNSSHDRSMALEIRSNNEDPLYGHVPPAPMEVTNQAIVHPSSNSEPDSHAPVGAFRTQSLGTRNVFTPSEINNHLRQTATQSMNRMHSPLVNDPLKNELDRLHKESEQTMKYYEHVKLQLKSDCEREIEEIRRKYDVKLQESELEFQQKKKNLDTNLNLVQMNKMWAEAFRSKCMDLRASGAPGMQQDLGLAQQLAWLSRQQRDMRSSLIASPPLGPPASTPQHFATAASSQAMAPPHVSSMPIFMTPMPAAASSLPMAPPISSTTGSQTMALPLLAAYTAPPRPPHINSISPLANHQAGSGFRTTPPHLQHYRPSTSLPDWSQQAPNNIPVMPSLPNRPRPTLPTNISDPHNRVHRPEIPVLLPNPSLSAREPAMDGNCQLGMNLANTLLRSSNATSLQQSEFGTATRVQDDSVRPAMLHDIVCLSDDD 2211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1286 2211 PANTHER HELICASE PROTEIN MOM1 828 2211 IPR039322 GO:0031507
Lele31g1286 2211 MobiDBLite consensus disorder prediction 1680 1696 - -
Lele31g1286 2211 MobiDBLite consensus disorder prediction 1524 1548 - -
Lele31g1286 2211 MobiDBLite consensus disorder prediction 1680 1711 - -
Lele31g1286 2211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 614 IPR027417 -
Lele31g1286 2211 MobiDBLite consensus disorder prediction 1630 1665 - -
Lele31g1286 2211 Coils Coil 1312 1332 - -
Lele31g1286 2211 SUPERFAMILY FYVE/PHD zinc finger 176 229 IPR011011 -
Lele31g1286 2211 SMART chromo_7 238 301 IPR000953 -
Lele31g1286 2211 SMART chromo_7 324 400 IPR000953 -
Lele31g1286 2211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 233 IPR013083 -
Lele31g1286 2211 Coils Coil 1902 1922 - -
Lele31g1286 2211 SUPERFAMILY Chromo domain-like 198 301 IPR016197 -
Lele31g1286 2211 MobiDBLite consensus disorder prediction 1634 1665 - -
Lele31g1286 2211 ProSitePatterns Zinc finger PHD-type signature. 182 225 IPR019786 -
Lele31g1286 2211 Gene3D - 440 647 IPR038718 -
Lele31g1286 2211 ProSiteProfiles Zinc finger PHD-type profile. 179 228 IPR019787 -
Lele31g1286 2211 SMART PHD_3 181 226 IPR001965 -
Lele31g1286 2211 Gene3D - 648 884 IPR027417 -
Lele31g1286 2211 Gene3D - 328 397 - -
Lele31g1286 2211 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 735 898 IPR001650 -
Lele31g1286 2211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 645 884 IPR027417 -
Lele31g1286 2211 Pfam Helicase conserved C-terminal domain 734 843 IPR001650 -
Lele31g1286 2211 ProSiteProfiles Chromo and chromo shadow domain profile. 239 301 IPR000953 -
Lele31g1286 2211 MobiDBLite consensus disorder prediction 1502 1548 - -
Lele31g1286 2211 MobiDBLite consensus disorder prediction 1051 1076 - -
Lele31g1286 2211 SUPERFAMILY Chromo domain-like 355 397 IPR016197 -
Lele31g1286 2211 CDD SF2_C_SNF 717 839 - -
Lele31g1286 2211 Pfam SNF2-related domain 466 705 IPR000330 GO:0005524|GO:0140658
Lele31g1286 2211 Gene3D - 1872 1954 - -
Lele31g1286 2211 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 447 611 IPR014001 -
Lele31g1286 2211 Gene3D - 240 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1286 Lele-ChrLele31 18989704 19007625 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lele31g1286 SNF2_N 1.5e-10 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0264 29 1545503 1561169 Lele31g1286 31 18989704 19007625 hybridization
Lele30g1150 30 14423346 14434540 Lele31g1286 31 18989704 19007625 hybridization