Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1285 ATGATTCAGAATCAAAGGGTCATAGTGGCGAAGAAATCAAATCTTGACATTATGATTTATCTCTGGTTCATTATTGCCTTACTATGCATTAGTTCAAGTTCTGCTCGGCAATTCTATGACCCCACAAATTGTTCTACAGATCCTGACACCTACCCAGGTTCGAGGTACACATGTAAAACTCCCCAAGATCCATGCGAAACTTACTTGGTGTTCAGATCAAACCAACGTTTTCACAACATTTCTGAGATCTCAAAGCTCTTCCACCTGAACCCTGACACGCTGCTTCAAGAAAATAACCACCTTATTCTCAATTCTTCTTCTCAGTTCCTTGAAGATGGCAAAGAGGTTCTTATTCCTGTCTCTTGTTCCTGTTCCGGCGGTTTCTATCAAGTCAGTTTCAGAAATGTAGTCACAGAAAACACAACATTTTCACAGATTGCTTGTGGCGTTTATGAAGGGCTGCTAAAATCTTCCACACTCGAACAGGTTAACCTTAATACTACCATAGCTGGTTCTGAGCTTAATGTTCCTCTTAGATGCGCATGTCCTGATAATTCCACTACCATTGGCGAGAAGGTGAAGTATCTTGTGACATACCCCATATTAACAGGAGATTCAGATAGTGACATAAGCGCGAAATTTGGCATCTCAGAAGAAGATCTCTTTGAAGCTAATGGCTTGAATAAATTTTCAACTCTTTTCGCAGAAACAACTGTTTTGATCCCCGCAAGAGATGATCCAATCAAGATAACTGATATTCCAAAGTCGTCTCCAGCTCCAACTTCTGGTTTTCTTCCAACACTTCCAGTGGCAAAAAGAGTAAAAAATCCAACAAGTTTGTACATCGCAGGTTCTGTCATAGGATTTTTGCTGTTAATCATGGCAGTTACTGTGAGTGTATTGTATGTTAAGGCCTTGAGGAAATGGAAGAGCGAAAGTGTTCAACCCTTCACTACTCCTTCAACCTCCGTCTTCATGTCACCGATGAGAGGTTCGTCAACAACTTCATGTCTTTCTCCGGATCTTCTCGCCGGAATAAAGTACTGTTTGGTCAATTACAGCATAGAAGAGCTCAGAATGGCCACAAAAGATTTCAGTGAAGAAACCCAGAAAAGCGATTCAGTCTACAAGGGGTTAATCACTAATCTTGAGGTGATGATCAAGAGGACGAGATTTGAAGACACGCGTCGGGTAATTGATTTACATTCTAAGATCAACCACATCAATATTGTGAACTTGCTTGGTGTTTGTTATGATGAGAGTGATATGTCATGGTCATATTTGGTTTTTGAATGGCCTAAAAATGGGCGCTTAAGGGACTGTTTATCTGATGGATCCAATAATCTCCTCTGTTGGAAACAGAGGACACAAATAGCTTTTGATATAGCCACAGTTCTTCACTATTTACACTGCTGTGCTTTTCCTTCTTACGCTCATTTGAATGTTAGCAGTAGAAATATATTCATCACAGAAGACCTTAGAGGGAAACTAGCAGACATTGCTGCACCAGAGAACCTTGTAAGAGGTCCAGTTTCTGAGAAAGTAGACATTTTTGCATTTGGGGTTGTGTTACTTGAACTGATCTCTGGAAGAGAGAACATTGAAGGGAAATTAGTGAGAGATTCTGTTGGGTTTTTGGGAGGGGGAGGAGGCAACGAAGGAGGTTGCTTTGAAGGGTTGAGGAGTTTCATGGATCCTAATCTGAAGGATTATCATCTTGCAGAGTCTCTGTGTTTGGCTGTTTTAGCAAAGGCTTGTGTCGCTGATGAACCCTTGCATAGACCAACCATGGATGACATCATGAAGGTCCTTGCAAAAATGGTTTCTCCACAACAACCAGAGAAATAA 1848 0.4102 MIQNQRVIVAKKSNLDIMIYLWFIIALLCISSSSARQFYDPTNCSTDPDTYPGSRYTCKTPQDPCETYLVFRSNQRFHNISEISKLFHLNPDTLLQENNHLILNSSSQFLEDGKEVLIPVSCSCSGGFYQVSFRNVVTENTTFSQIACGVYEGLLKSSTLEQVNLNTTIAGSELNVPLRCACPDNSTTIGEKVKYLVTYPILTGDSDSDISAKFGISEEDLFEANGLNKFSTLFAETTVLIPARDDPIKITDIPKSSPAPTSGFLPTLPVAKRVKNPTSLYIAGSVIGFLLLIMAVTVSVLYVKALRKWKSESVQPFTTPSTSVFMSPMRGSSTTSCLSPDLLAGIKYCLVNYSIEELRMATKDFSEETQKSDSVYKGLITNLEVMIKRTRFEDTRRVIDLHSKINHINIVNLLGVCYDESDMSWSYLVFEWPKNGRLRDCLSDGSNNLLCWKQRTQIAFDIATVLHYLHCCAFPSYAHLNVSSRNIFITEDLRGKLADIAAPENLVRGPVSEKVDIFAFGVVLLELISGRENIEGKLVRDSVGFLGGGGGNEGGCFEGLRSFMDPNLKDYHLAESLCLAVLAKACVADEPLHRPTMDDIMKVLAKMVSPQQPEK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1285 615 Pfam LysM domain 203 242 IPR018392 -
Lele31g1285 615 Pfam Protein tyrosine and serine/threonine kinase 389 500 IPR001245 GO:0004672|GO:0006468
Lele31g1285 615 Gene3D LysM domain 185 250 IPR036779 -
Lele31g1285 615 Gene3D Transferase(Phosphotransferase) domain 1 364 500 - -
Lele31g1285 615 SUPERFAMILY Protein kinase-like (PK-like) 374 608 IPR011009 -
Lele31g1285 615 Gene3D Transferase(Phosphotransferase) domain 1 501 614 - -
Lele31g1285 615 ProSiteProfiles LysM domain profile. 197 241 IPR018392 -
Lele31g1285 615 CDD LysM 204 241 IPR018392 -
Lele31g1285 615 ProSiteProfiles Protein kinase domain profile. 322 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1285 615 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 22 610 - -
Lele31g1285 615 SMART LysM_2 198 242 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1285 Lele-ChrLele31 18985920 18988520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1285 23 612 Receptor kinase-like Gene Family AT2G23770 30.048 2.52e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g1285 PK_Tyr_Ser-Thr 8.8e-14 CL0016