Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1277 ATGGCCGTCGACGCTTCCACCCCTCGAAACTCTCGCACCCCTAAACCAAGAACTTCATCTTCTTCCAGACCCACCTTATCCGCCGCTGCCGCCGCCTCCTCTTCTTCCTCCGACCCCTCCTCCTCTTACTCCAGCTCTGCCGCTTACTCTGGCTCCTCCGGTTTCAGACTCACCTCCGACACCTCCATTTCGAGCGGAACCTCTCTCGCTTGTTTTAGAGATAGCCTCCCTGAAAACCCCCACATCTATGACTTCTCTGAAATTTGCTCCGCCACCAACAATTTCCTTGCCAAGCGTTATTCCTCCTCCTCCTCCTCTTCTACTCCCTCTTGGCGATGTACTCTCAGAGGCCGAGACGTCATTGTTTTCCAGCGCAAGTTCCGTCGCAAACTCCAGGTGAATCAACTCAGAGAACGCCTCTCTGTGATCTGCCGTAGCCACCACGTTAGCATCATCAAGCTCGCTGGTGCTTGCATCTCTGGCGACCACATCTACCTCGTGTACGACTTCGTGAATGGAGCTAATCTCTCCGATTGTTTGCGAAATTCGAAGAACCTTAACTTCACGGTCCTGTCCAGTTGGACTTCCAGAATGCAGGTTGCTACGGATCTCGCCGAGGGGCTTGATTACATCCACAATAAAACCGGCCTAACCCTAAACTTCGTGCACAATAACATCAAGAGTAGTGCGATAATCGTGACAGAACCTTCGTTCAACGCCAGGATTTCACACTTCGGCGCCGCTCAGCTGTGCGGTGAGATCGACGAAGAGAGCGAAAATGCGAAACAGATGGAAGAGATTCCAGAGGAGCCGTCTTCCTCCCCATCTTCCACGAAATCAAAGGACGTAAGACGATCGAGAAGCTCTAACACGCAATTGGAGGGCGTAAGAGGGTACATGGCACCGGAATACCAATTCACCGGTGTGGCCACCCAGAAGTCCGATGTGTACGCATTTGGGGTAGTGATCTTGGAGTTGCTGTCGGGAGACGAACCTTTGAAGTTCAAATACGATAAGCAGACCGGCGAGTTCGTTACCAACTCGGTGATCGATACGGCGAGGGCTGTCCTGGAGGGTAATCCCGACGGCGGAGGTGCCGTTGAAGGGAGGCTGAGGAGATGGATGGACCGGAGGCTGAAGGACTCGTTCCCGGTGGAGGTGGTGGAAGAGGTGACACGTGTAGCACTTGAGTGCATAAACGTCGATCCAGATAAGAGGCCCAATATGGGACGCGTCGCTGGAAAAATCTCGCGGCTATATCTCAAGTCTAGGATTTGGTCCGACAACATGAGAACGCCCACTGATATTCTTTCAGCCTCATTCGCTGCTCGATGA 1335 0.5303 MAVDASTPRNSRTPKPRTSSSSRPTLSAAAAASSSSSDPSSSYSSSAAYSGSSGFRLTSDTSISSGTSLACFRDSLPENPHIYDFSEICSATNNFLAKRYSSSSSSSTPSWRCTLRGRDVIVFQRKFRRKLQVNQLRERLSVICRSHHVSIIKLAGACISGDHIYLVYDFVNGANLSDCLRNSKNLNFTVLSSWTSRMQVATDLAEGLDYIHNKTGLTLNFVHNNIKSSAIIVTEPSFNARISHFGAAQLCGEIDEESENAKQMEEIPEEPSSSPSSTKSKDVRRSRSSNTQLEGVRGYMAPEYQFTGVATQKSDVYAFGVVILELLSGDEPLKFKYDKQTGEFVTNSVIDTARAVLEGNPDGGGAVEGRLRRWMDRRLKDSFPVEVVEEVTRVALECINVDPDKRPNMGRVAGKISRLYLKSRIWSDNMRTPTDILSASFAAR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1277 444 MobiDBLite consensus disorder prediction 257 294 - -
Lele31g1277 444 SUPERFAMILY Protein kinase-like (PK-like) 112 412 IPR011009 -
Lele31g1277 444 PANTHER OS09G0572100 PROTEIN 2 444 - -
Lele31g1277 444 Coils Coil 247 267 - -
Lele31g1277 444 Pfam Protein kinase domain 130 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1277 444 Gene3D Phosphorylase Kinase; domain 1 59 170 - -
Lele31g1277 444 MobiDBLite consensus disorder prediction 1 43 - -
Lele31g1277 444 ProSiteProfiles Protein kinase domain profile. 57 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1277 444 Gene3D Transferase(Phosphotransferase) domain 1 172 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1277 Lele-ChrLele31 18930563 18931897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1277 78 444 Receptor kinase-like Gene Family AT1G51940 28.610 3.92e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele31g1277 Pkinase 1.2e-23 CL0016