Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1273 ATGCATGGCGTAACAGGCAGAGAGCAAACCTTTGTATCGTCGGTTGTTTCCTCGATGGTCCCAATTGATACAACCGCCAACTTCGCTTTCCCTGTAGATTCAGAGCACAAATCCAAGGTGTTCAAACCCTTGTCTATAGCCAAACCCCACATGAGAACCTTCCATTTATCTTGGATCTCCTTCTTCTCTTGCTTCGTTTCAACCTTCGCAGCTGCTCCTTTGGTTCCCATAATCCGGGACAACCTCAACCTCACAAAGTACGACATCGGCAATGCTGGGGTTGTCTTTGTCTCAGGCAGCATCTTCTCAAGGCTCACGATGGGTGCAGTGTGTGACCTAGTAGGCCCTCGCTATGACTTACCTGATGGAAACCTCTTTACCTTGCAGAAAAATGGCAATGTTACTAAAGACAAGTTCTCCAAGGTCAGTTTTTCTTTTTCTTTTTTTCTGATTGACATATGTGCATGCGTGTGTGCTTGGTATGCCATAACAAATTACAGAACATGGATTTTTGTTCTTCTCTATGGTTACTCTATGGGGCTAGAATTAACCACTGACAATGTCATTGCCGAGTATTTCTGCGACAGTTTCAATCTGAAGCTTCACACAGCTGGGGTAATCGCAGCAACATTTGGAATGGCCAACATCGTGGCTCGTCCCTTTGGTGGATATGCTTCAGATACGGCAGCTCGCATATTTGGGATGCGAGGGAGGCTTTGGGTGCTGTGGATTCTGCAGACCTTAGGAGGGGTCTTCTGTATATGGTTTGGCCGAGCTAATTCGCTGCCAATTGCTGTGTTAGCCATGATTCTCTTCTCTGTGGGAGCTCGGGCTGCATGTGGTGCAATATTTGGTATAATCCCATTCATCTCAAGGAGGTCTCTGGGGATCATATCGGGTCTGGAAGGGGCAGGGGGAAACTTCGGGTCCGGTTTGACCCAGTTGATTTTCTTTTCAACCTCCAAGTTCTCTACTTCTGCTGGTCTTTCCTTGATGGGTGTGATGATTGTGTGTTGTACACTTCCTGTGAATCTGGTTCACTTCCCACAATGGGGAAGCATGTTTCTTCCTCCAACCGAAGATGTTGATAAATCCACTGAAGAATATTATTATGCTTCTGAATGGAGCGACGACGAGAAGCAGAAGGGATTGCATCAGCAGAGTCTCAAGTTTGCAGCCAACAGCCGATCTGAGAGAGGCAAGTGCGTGGCCTCAGCTCCAACACCACCAAATACAACTCCTTTCTGA 1248 0.4696 MHGVTGREQTFVSSVVSSMVPIDTTANFAFPVDSEHKSKVFKPLSIAKPHMRTFHLSWISFFSCFVSTFAAAPLVPIIRDNLNLTKYDIGNAGVVFVSGSIFSRLTMGAVCDLVGPRYDLPDGNLFTLQKNGNVTKDKFSKVSFSFSFFLIDICACVCAWYAITNYRTWIFVLLYGYSMGLELTTDNVIAEYFCDSFNLKLHTAGVIAATFGMANIVARPFGGYASDTAARIFGMRGRLWVLWILQTLGGVFCIWFGRANSLPIAVLAMILFSVGARAACGAIFGIIPFISRRSLGIISGLEGAGGNFGSGLTQLIFFSTSKFSTSAGLSLMGVMIVCCTLPVNLVHFPQWGSMFLPPTEDVDKSTEEYYYASEWSDDEKQKGLHQQSLKFAANSRSERGKCVASAPTPPNTTPF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1273 415 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 119 402 IPR044772 GO:0015112
Lele31g1273 415 SUPERFAMILY MFS general substrate transporter 160 346 IPR036259 -
Lele31g1273 415 Gene3D MFS general substrate transporter like domains 146 353 IPR036259 -
Lele31g1273 415 MobiDBLite consensus disorder prediction 377 415 - -
Lele31g1273 415 FunFam Nitrate transporter 2.1 154 353 - -
Lele31g1273 415 SUPERFAMILY MFS general substrate transporter 43 120 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1273 Lele-ChrLele31 18890197 18892087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1273 119 410 Inorganic Solute Cotransporters AT5G60770 74.315 3.20e-155 447