Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1258 ATGACTGGGAAAGTATTAATCTCCGACTCTAACCTACCTCAGCCTTTCAAGCTTCGCCCAGTTTCAGTTCCAAAAAACAAATTTGAGCTCCTAGAATTGCCTTTGTTGCACGAGCGTAATTTTACATACGGTGGCCCTATGGAGCCTGACAGATTAAATTCCCCGATAACGTTTGATATGCCATTGGAGATTTTGGGTCATGAGTTGCACTTTTCTCAGGATCCTAATTCCAAGCACTTGGGAACTACTGTATGGGATGCATCACTTGTGTTCGCCAAGTTTCTAGAAAAAAACTGCAGAAAGGGAAAGTTTTCCCCAGCTAAGCTTAAAGGAAACCGTGTAATTGAACTTGGAGCTGGTTGTGGAGTCTCGGGATTTGGCATGGCTTTGCTGGGGTGTGATGTTATAGTGACAGACCAAAAAGAGGTCTTGCCAATACTACAGAGAAATGTAGAGCGAAATATTTCAAGGGTCATGCAGAAAAATCCTGATATATTTGGCTCAATCAAGGTTTCAGAGTTACAGTGGGGGGACAGGGATCACATTGGGGCTGTCGAACCTCCCTTTGACTACATTATTGGCACTGATGTTGTTTATGTAGAGCATTTGTTGGAGCCTCTGCTGCAGACAATCGTTGCTTTATCTGGACCTAGGACTACAATTTTGCTGGGCTACGAGATCCGTTCCACCATCGTCCATGAGCAGATGCTTCAGATGTGGAAAAAAAACTTTGATGTCAAGACTGTTCCAAAGTCCAAGATGGATGAAACGTTCCAACATCCTAGTATTCAGCTCTTCATCATGGGATCAAAACCTAAGGCAGAGCGCCTAGAAAACACAGGTCTCGTTACTGCTGCTGAGAAAGTTGATGGCGTTGAAACGAGTGGGGAAGACAAAATTAGTGACGAAAATGTTGCCGAAGAAAAAGGGTCTGATAATGCAGAAGAAAAAGCTGAGACAATCCCCCCGAACACAAAACTCAGTGAGTGGGAAGCCAGGAGATATGGCTCGATAGCTGGAAGGATGTTGCGAGACGTGAAAATAACATGA 1050 0.441 MTGKVLISDSNLPQPFKLRPVSVPKNKFELLELPLLHERNFTYGGPMEPDRLNSPITFDMPLEILGHELHFSQDPNSKHLGTTVWDASLVFAKFLEKNCRKGKFSPAKLKGNRVIELGAGCGVSGFGMALLGCDVIVTDQKEVLPILQRNVERNISRVMQKNPDIFGSIKVSELQWGDRDHIGAVEPPFDYIIGTDVVYVEHLLEPLLQTIVALSGPRTTILLGYEIRSTIVHEQMLQMWKKNFDVKTVPKSKMDETFQHPSIQLFIMGSKPKAERLENTGLVTAAEKVDGVETSGEDKISDENVAEEKGSDNAEEKAETIPPNTKLSEWEARRYGSIAGRMLRDVKIT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1258 349 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 50 259 IPR019410 -
Lele31g1258 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 229 IPR029063 -
Lele31g1258 349 MobiDBLite consensus disorder prediction 290 322 - -
Lele31g1258 349 MobiDBLite consensus disorder prediction 291 316 - -
Lele31g1258 349 CDD AdoMet_MTases 113 227 - -
Lele31g1258 349 Pfam Lysine methyltransferase 67 232 IPR019410 -
Lele31g1258 349 Gene3D Vaccinia Virus protein VP39 62 275 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1258 Lele-ChrLele31 18800243 18803835 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0294 29 1739717 1742903 Lele31g1258 31 18800243 18803835 hybridization
Lele30g1121 30 14245188 14248647 Lele31g1258 31 18800243 18803835 hybridization