Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1218 ATGACGTGCTATACAGTAAAGATCGCTTCGCCTTTTTACCAAATTCCACGCAGATAGTGGAGTGGAGAATCATGGTTGAAGGAATGGAGTGGGGATGAAGTTAATGGAATAGGTTCTGTGTTTGAATGTGTCAAGGCTGGGGCACCTGTTGAAGTAGACCCAGATGAGTTTGGTAAATGCATACACCTGTCTCAGGCTGCTATTGGTGAGGCAAAGAATAAATCGAGTGATCCTGCGATCCTTTATCTGAAGTTTGGTGACCAGAAGCTTGTTTTAGGAACCCTTTCCCAGGAGAAATTCCCTCAACTATGTTTTGATTTGGTTCTAGAGAAAAAGTTTGAGCTCTCTCACAATTGGAAAAGTGGAAGTGTTTATTTCTGTGGTTACAAAGCGGAATTACCAGGATATCCTTTGCAATTGATTGCTGGTAGCACGGAGATGGATGAGGACTTGACTGACAGTGAGGATGATGAGGATATCCCAGTCTTGGTCAAAGATAATGCAAAACCCGATATAAAGCCTGAAGTAGCAAAGGCTGCTGCATCTAAAAGTAATGATGTCAAGCCTGCTGATTCAAAAAAACAAGTCAAGGTTGTGGATCCAAAGAAAGATGACGATGATTCAGATGACGAAGAGGATGATGAAGATGACAGTTCTGATGAGGATATGTTGGGTGTTGATGTTGATGGTAGTGATGAGAGCGAGAGTGATGAAGATGATAATGAAACCCCTCCTAAAAAGGTTGATCAGGCTAAGAGGCCTAACGAATCTGCACTGAAAACTCCTGTTCCTACCAAGAAAGCAAAATCTGCTACCCCTCAAAAGACTGTGGGTTCAGATTTTGAATATGCTAAATTCAGTATGAAATTTCCATTTCCCAAGCCTTCCTGCTTCCTCTGTACCCAATTTCCAATGCACTACCTGAAGATGGTTGAAAAACAGAATTCAAGATTTCATTCAGGACTTTTAACTCAGAAGGGGGTCTGCAACAACATTCAAAGGCTAAGCATGGTCCGTGATGCTAAGTATTGGGAATTAGGTGTTACCATGAGTGCGGTGAGGACATTATTATCCTTGCCATTTTGGTCTCATAGTGAAGATTGGCATTGGTACGTGATTGAAGGGCAAATGAAGCTTCTAGAAAAACTCGAGCTCTGTGGTACTTTTTATGTTCTCCTATCGTGA 1185 0.4186 MTCYTVKIASPFYQIPRRXWSGESWLKEWSGDEVNGIGSVFECVKAGAPVEVDPDEFGKCIHLSQAAIGEAKNKSSDPAILYLKFGDQKLVLGTLSQEKFPQLCFDLVLEKKFELSHNWKSGSVYFCGYKAELPGYPLQLIAGSTEMDEDLTDSEDDEDIPVLVKDNAKPDIKPEVAKAAASKSNDVKPADSKKQVKVVDPKKDDDDSDDEEDDEDDSSDEDMLGVDVDGSDESESDEDDNETPPKKVDQAKRPNESALKTPVPTKKAKSATPQKTVGSDFEYAKFSMKFPFPKPSCFLCTQFPMHYLKMVEKQNSRFHSGLLTQKGVCNNIQRLSMVRDAKYWELGVTMSAVRTLLSLPFWSHSEDWHWYVIEGQMKLLEKLELCGTFYVLLS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1218 394 MobiDBLite consensus disorder prediction 147 273 - -
Lele31g1218 394 FunFam Histone deacetylase HDT1 39 135 - -
Lele31g1218 394 Pfam Nucleoplasmin-like domain 44 129 IPR041232 -
Lele31g1218 394 MobiDBLite consensus disorder prediction 205 239 - -
Lele31g1218 394 MobiDBLite consensus disorder prediction 240 254 - -
Lele31g1218 394 Gene3D Nucleoplasmin core domain 42 133 - -
Lele31g1218 394 MobiDBLite consensus disorder prediction 187 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1218 Lele-ChrLele31 18533901 18539851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1218 44 130 C2H2 Transcription Factor Family AT3G44750 59.770 1.58e-26 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1218 31 18533901 18539851 Lele09g1092 09 20085750 20087638 CCT
Lele31g1218 31 18533901 18539851 Lele11g1090 11 18179722 18183666 CCT
Lele31g1218 31 18533901 18539851 Lele12g0228 12 1948347 1953815 CCT
Lele29g0325 29 1972974 1974128 Lele31g1218 31 18533901 18539851 hybridization
Lele30g1079 30 14001015 14001667 Lele31g1218 31 18533901 18539851 hybridization